Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
HPS1Q92902 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HPS1Q92902 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HPS1Q92902 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HPS1Q92902 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HPS1Q92902 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HPS1Q92902 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.64■□□□□ 0.89
HPS1Q92902 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HPS1Q92902 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HPS1Q92902 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HPS1Q92902 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HPS1Q92902 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HPS1Q92902 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HPS1Q92902 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HPS1Q92902 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.63■□□□□ 0.89
HPS1Q92902 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HPS1Q92902 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HPS1Q92902 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.63■□□□□ 0.89
HPS1Q92902 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
HPS1Q92902 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HPS1Q92902 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HPS1Q92902 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
HPS1Q92902 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HPS1Q92902 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HPS1Q92902 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HPS1Q92902 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HPS1Q92902 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HPS1Q92902 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HPS1Q92902 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.62■□□□□ 0.89
HPS1Q92902 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HPS1Q92902 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.62■□□□□ 0.89
HPS1Q92902 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HPS1Q92902 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
HPS1Q92902 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HPS1Q92902 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HPS1Q92902 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HPS1Q92902 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HPS1Q92902 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HPS1Q92902 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HPS1Q92902 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HPS1Q92902 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.61■□□□□ 0.89
HPS1Q92902 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.61■□□□□ 0.89
HPS1Q92902 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HPS1Q92902 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HPS1Q92902 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HPS1Q92902 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
HPS1Q92902 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HPS1Q92902 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.61■□□□□ 0.89
HPS1Q92902 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.61■□□□□ 0.89
HPS1Q92902 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HPS1Q92902 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HPS1Q92902 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HPS1Q92902 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HPS1Q92902 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HPS1Q92902 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPS1Q92902 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPS1Q92902 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPS1Q92902 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPS1Q92902 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
HPS1Q92902 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.6■□□□□ 0.89
HPS1Q92902 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPS1Q92902 AC093536.1-201ENST00000569153 554 ntBASIC20.6■□□□□ 0.89
HPS1Q92902 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.6■□□□□ 0.89
HPS1Q92902 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPS1Q92902 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.59■□□□□ 0.89
HPS1Q92902 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPS1Q92902 AC137767.1-201ENST00000602918 1920 ntBASIC20.59■□□□□ 0.89
HPS1Q92902 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
HPS1Q92902 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HPS1Q92902 RARRES2P1-201ENST00000474487 481 ntBASIC20.59■□□□□ 0.89
HPS1Q92902 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPS1Q92902 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPS1Q92902 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPS1Q92902 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HPS1Q92902 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPS1Q92902 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HPS1Q92902 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.58■□□□□ 0.89
HPS1Q92902 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HPS1Q92902 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HPS1Q92902 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HPS1Q92902 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HPS1Q92902 DUX4L18-201ENST00000553347 1267 ntBASIC20.58■□□□□ 0.89
HPS1Q92902 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HPS1Q92902 RAP2CP1-202ENST00000605179 643 ntBASIC20.58■□□□□ 0.89
HPS1Q92902 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
HPS1Q92902 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.58■□□□□ 0.89
HPS1Q92902 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
HPS1Q92902 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HPS1Q92902 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HPS1Q92902 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
HPS1Q92902 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS1Q92902 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS1Q92902 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.57■□□□□ 0.88
HPS1Q92902 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HPS1Q92902 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HPS1Q92902 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPS1Q92902 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HPS1Q92902 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HPS1Q92902 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.57■□□□□ 0.88
HPS1Q92902 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms