Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
PPP4R1Q8TF05 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
PPP4R1Q8TF05 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PPP4R1Q8TF05 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.79■■□□□ 1.24
PPP4R1Q8TF05 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PPP4R1Q8TF05 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PPP4R1Q8TF05 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PPP4R1Q8TF05 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.78■■□□□ 1.24
PPP4R1Q8TF05 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PPP4R1Q8TF05 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
PPP4R1Q8TF05 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PPP4R1Q8TF05 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.77■■□□□ 1.24
PPP4R1Q8TF05 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.77■■□□□ 1.24
PPP4R1Q8TF05 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
PPP4R1Q8TF05 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.76■■□□□ 1.23
PPP4R1Q8TF05 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.76■■□□□ 1.23
PPP4R1Q8TF05 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
PPP4R1Q8TF05 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.76■■□□□ 1.23
PPP4R1Q8TF05 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
PPP4R1Q8TF05 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PPP4R1Q8TF05 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PPP4R1Q8TF05 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R1Q8TF05 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R1Q8TF05 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R1Q8TF05 PKD1P6-201ENST00000343738 4769 ntBASIC22.75■■□□□ 1.23
PPP4R1Q8TF05 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R1Q8TF05 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R1Q8TF05 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R1Q8TF05 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R1Q8TF05 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.75■■□□□ 1.23
PPP4R1Q8TF05 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
PPP4R1Q8TF05 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PPP4R1Q8TF05 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
PPP4R1Q8TF05 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R1Q8TF05 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R1Q8TF05 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R1Q8TF05 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R1Q8TF05 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.74■■□□□ 1.23
PPP4R1Q8TF05 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R1Q8TF05 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R1Q8TF05 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R1Q8TF05 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R1Q8TF05 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R1Q8TF05 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R1Q8TF05 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PPP4R1Q8TF05 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R1Q8TF05 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R1Q8TF05 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R1Q8TF05 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R1Q8TF05 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R1Q8TF05 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R1Q8TF05 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R1Q8TF05 DUX4L9-201ENST00000449051 1259 ntBASIC22.73■■□□□ 1.23
PPP4R1Q8TF05 AC018755.3-202ENST00000596210 929 ntBASIC22.73■■□□□ 1.23
PPP4R1Q8TF05 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PPP4R1Q8TF05 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
PPP4R1Q8TF05 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R1Q8TF05 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R1Q8TF05 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R1Q8TF05 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R1Q8TF05 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PPP4R1Q8TF05 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.72■■□□□ 1.23
PPP4R1Q8TF05 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
PPP4R1Q8TF05 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.72■■□□□ 1.23
PPP4R1Q8TF05 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
PPP4R1Q8TF05 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PPP4R1Q8TF05 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.71■■□□□ 1.23
PPP4R1Q8TF05 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
PPP4R1Q8TF05 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PPP4R1Q8TF05 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
PPP4R1Q8TF05 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.71■■□□□ 1.23
PPP4R1Q8TF05 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
PPP4R1Q8TF05 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
PPP4R1Q8TF05 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms