Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RDH11Q8TC12 AL592293.1-201ENST00000502889 1188 ntBASIC22.54■■□□□ 1.2
RDH11Q8TC12 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RDH11Q8TC12 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RDH11Q8TC12 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RDH11Q8TC12 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.54■■□□□ 1.2
RDH11Q8TC12 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RDH11Q8TC12 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RDH11Q8TC12 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RDH11Q8TC12 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
RDH11Q8TC12 SPCS2P3-201ENST00000500401 656 ntBASIC22.53■■□□□ 1.2
RDH11Q8TC12 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RDH11Q8TC12 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RDH11Q8TC12 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RDH11Q8TC12 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RDH11Q8TC12 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.52■■□□□ 1.2
RDH11Q8TC12 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RDH11Q8TC12 AL022069.1-201ENST00000568025 1636 ntBASIC22.52■■□□□ 1.2
RDH11Q8TC12 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RDH11Q8TC12 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RDH11Q8TC12 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RDH11Q8TC12 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RDH11Q8TC12 AL117328.2-201ENST00000624617 1940 ntBASIC22.51■■□□□ 1.19
RDH11Q8TC12 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RDH11Q8TC12 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RDH11Q8TC12 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
RDH11Q8TC12 MIR6765-201ENST00000614092 87 ntBASIC22.51■■□□□ 1.19
RDH11Q8TC12 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RDH11Q8TC12 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RDH11Q8TC12 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RDH11Q8TC12 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RDH11Q8TC12 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RDH11Q8TC12 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.51■■□□□ 1.19
RDH11Q8TC12 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RDH11Q8TC12 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RDH11Q8TC12 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.5■■□□□ 1.19
RDH11Q8TC12 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.5■■□□□ 1.19
RDH11Q8TC12 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.5■■□□□ 1.19
RDH11Q8TC12 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RDH11Q8TC12 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RDH11Q8TC12 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RDH11Q8TC12 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RDH11Q8TC12 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RDH11Q8TC12 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.49■■□□□ 1.19
RDH11Q8TC12 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RDH11Q8TC12 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RDH11Q8TC12 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
RDH11Q8TC12 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.49■■□□□ 1.19
RDH11Q8TC12 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.49■■□□□ 1.19
RDH11Q8TC12 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RDH11Q8TC12 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RDH11Q8TC12 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.49■■□□□ 1.19
RDH11Q8TC12 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RDH11Q8TC12 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RDH11Q8TC12 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RDH11Q8TC12 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.48■■□□□ 1.19
RDH11Q8TC12 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RDH11Q8TC12 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RDH11Q8TC12 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.48■■□□□ 1.19
RDH11Q8TC12 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.48■■□□□ 1.19
RDH11Q8TC12 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RDH11Q8TC12 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.48■■□□□ 1.19
RDH11Q8TC12 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RDH11Q8TC12 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RDH11Q8TC12 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RDH11Q8TC12 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RDH11Q8TC12 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RDH11Q8TC12 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
RDH11Q8TC12 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RDH11Q8TC12 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RDH11Q8TC12 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RDH11Q8TC12 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
RDH11Q8TC12 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RDH11Q8TC12 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RDH11Q8TC12 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RDH11Q8TC12 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RDH11Q8TC12 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.46■■□□□ 1.19
RDH11Q8TC12 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.46■■□□□ 1.19
RDH11Q8TC12 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
RDH11Q8TC12 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RDH11Q8TC12 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RDH11Q8TC12 LONRF2P2-201ENST00000439212 571 ntBASIC22.45■■□□□ 1.18
RDH11Q8TC12 DUX4L9-201ENST00000449051 1259 ntBASIC22.45■■□□□ 1.18
RDH11Q8TC12 AC011551.1-201ENST00000614101 683 ntBASIC22.45■■□□□ 1.18
RDH11Q8TC12 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RDH11Q8TC12 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RDH11Q8TC12 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RDH11Q8TC12 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RDH11Q8TC12 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RDH11Q8TC12 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RDH11Q8TC12 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.44■■□□□ 1.18
RDH11Q8TC12 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RDH11Q8TC12 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.44■■□□□ 1.18
RDH11Q8TC12 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
RDH11Q8TC12 AC233723.2-201ENST00000623798 2106 ntBASIC22.44■■□□□ 1.18
RDH11Q8TC12 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RDH11Q8TC12 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RDH11Q8TC12 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RDH11Q8TC12 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
RDH11Q8TC12 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms