Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
VPS52Q8N1B4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
VPS52Q8N1B4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
VPS52Q8N1B4 AC024257.2-201ENST00000549699 147 ntBASIC24.72■■□□□ 1.55
VPS52Q8N1B4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
VPS52Q8N1B4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.71■■□□□ 1.55
VPS52Q8N1B4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS52Q8N1B4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VPS52Q8N1B4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VPS52Q8N1B4 AC005703.6-201ENST00000623265 1329 ntBASIC24.71■■□□□ 1.55
VPS52Q8N1B4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VPS52Q8N1B4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.71■■□□□ 1.55
VPS52Q8N1B4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VPS52Q8N1B4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
VPS52Q8N1B4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS52Q8N1B4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
VPS52Q8N1B4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
VPS52Q8N1B4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
VPS52Q8N1B4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
VPS52Q8N1B4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
VPS52Q8N1B4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.54
VPS52Q8N1B4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.7■■□□□ 1.54
VPS52Q8N1B4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
VPS52Q8N1B4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
VPS52Q8N1B4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.7■■□□□ 1.54
VPS52Q8N1B4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.7■■□□□ 1.54
VPS52Q8N1B4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
VPS52Q8N1B4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.7■■□□□ 1.54
VPS52Q8N1B4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
VPS52Q8N1B4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
VPS52Q8N1B4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
VPS52Q8N1B4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
VPS52Q8N1B4 EDA-201ENST00000338901 1233 ntBASIC24.69■■□□□ 1.54
VPS52Q8N1B4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
VPS52Q8N1B4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
VPS52Q8N1B4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
VPS52Q8N1B4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.69■■□□□ 1.54
VPS52Q8N1B4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS52Q8N1B4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.68■■□□□ 1.54
VPS52Q8N1B4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS52Q8N1B4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
VPS52Q8N1B4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
VPS52Q8N1B4 AL355001.2-201ENST00000620617 1191 ntBASIC24.68■■□□□ 1.54
VPS52Q8N1B4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS52Q8N1B4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS52Q8N1B4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.68■■□□□ 1.54
VPS52Q8N1B4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
VPS52Q8N1B4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
VPS52Q8N1B4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
VPS52Q8N1B4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
VPS52Q8N1B4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.67■■□□□ 1.54
VPS52Q8N1B4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
VPS52Q8N1B4 RARRES2P6-201ENST00000567333 442 ntBASIC24.67■■□□□ 1.54
VPS52Q8N1B4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.67■■□□□ 1.54
VPS52Q8N1B4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
VPS52Q8N1B4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.66■■□□□ 1.54
VPS52Q8N1B4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
VPS52Q8N1B4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.66■■□□□ 1.54
VPS52Q8N1B4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.66■■□□□ 1.54
VPS52Q8N1B4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.66■■□□□ 1.54
VPS52Q8N1B4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS52Q8N1B4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS52Q8N1B4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.65■■□□□ 1.54
VPS52Q8N1B4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS52Q8N1B4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.65■■□□□ 1.54
VPS52Q8N1B4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
VPS52Q8N1B4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS52Q8N1B4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS52Q8N1B4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS52Q8N1B4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS52Q8N1B4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
VPS52Q8N1B4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.65■■□□□ 1.54
VPS52Q8N1B4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS52Q8N1B4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS52Q8N1B4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.64■■□□□ 1.54
VPS52Q8N1B4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.64■■□□□ 1.54
VPS52Q8N1B4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
VPS52Q8N1B4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
VPS52Q8N1B4 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.64■■□□□ 1.53
VPS52Q8N1B4 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.64■■□□□ 1.53
VPS52Q8N1B4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 DUX4L19-201ENST00000557448 1267 ntBASIC24.63■■□□□ 1.53
VPS52Q8N1B4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS52Q8N1B4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS52Q8N1B4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
VPS52Q8N1B4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
VPS52Q8N1B4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS52Q8N1B4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
VPS52Q8N1B4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 817.6 ms