Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
ABCA6Q8N139 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
ABCA6Q8N139 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC34.56■■■■□ 3.12
ABCA6Q8N139 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC34.56■■■■□ 3.12
ABCA6Q8N139 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
ABCA6Q8N139 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
ABCA6Q8N139 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
ABCA6Q8N139 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
ABCA6Q8N139 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC34.55■■■■□ 3.12
ABCA6Q8N139 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
ABCA6Q8N139 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
ABCA6Q8N139 RAB43-208ENST00000615093 783 ntTSL 5 BASIC34.55■■■■□ 3.12
ABCA6Q8N139 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC34.54■■■■□ 3.12
ABCA6Q8N139 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC34.54■■■■□ 3.12
ABCA6Q8N139 GRAMD4P2-201ENST00000423297 1097 ntBASIC34.54■■■■□ 3.12
ABCA6Q8N139 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC34.54■■■■□ 3.12
ABCA6Q8N139 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
ABCA6Q8N139 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
ABCA6Q8N139 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC34.53■■■■□ 3.12
ABCA6Q8N139 AC241377.3-202ENST00000626088 1088 ntBASIC34.53■■■■□ 3.12
ABCA6Q8N139 AC241585.3-202ENST00000628937 1088 ntBASIC34.53■■■■□ 3.12
ABCA6Q8N139 AC245100.8-202ENST00000629247 1058 ntBASIC34.53■■■■□ 3.12
ABCA6Q8N139 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC34.53■■■■□ 3.12
ABCA6Q8N139 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
ABCA6Q8N139 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC34.51■■■■□ 3.12
ABCA6Q8N139 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
ABCA6Q8N139 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
ABCA6Q8N139 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC34.51■■■■□ 3.11
ABCA6Q8N139 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
ABCA6Q8N139 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC34.5■■■■□ 3.11
ABCA6Q8N139 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
ABCA6Q8N139 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC34.5■■■■□ 3.11
ABCA6Q8N139 AC009086.3-201ENST00000623486 1008 ntBASIC34.5■■■■□ 3.11
ABCA6Q8N139 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
ABCA6Q8N139 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
ABCA6Q8N139 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC34.49■■■■□ 3.11
ABCA6Q8N139 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
ABCA6Q8N139 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC34.49■■■■□ 3.11
ABCA6Q8N139 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
ABCA6Q8N139 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC34.49■■■■□ 3.11
ABCA6Q8N139 AC010501.1-201ENST00000606270 1962 ntBASIC34.48■■■■□ 3.11
ABCA6Q8N139 MIR3181-201ENST00000578512 73 ntBASIC34.48■■■■□ 3.11
ABCA6Q8N139 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC34.48■■■■□ 3.11
ABCA6Q8N139 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
ABCA6Q8N139 ID1-201ENST00000376105 1233 ntBASIC34.48■■■■□ 3.11
ABCA6Q8N139 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC34.48■■■■□ 3.11
ABCA6Q8N139 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC34.48■■■■□ 3.11
ABCA6Q8N139 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC34.48■■■■□ 3.11
ABCA6Q8N139 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
ABCA6Q8N139 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC34.47■■■■□ 3.11
ABCA6Q8N139 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
ABCA6Q8N139 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
ABCA6Q8N139 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC34.47■■■■□ 3.11
ABCA6Q8N139 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC34.47■■■■□ 3.11
ABCA6Q8N139 STK32C-205ENST00000456004 607 ntTSL 2 BASIC34.47■■■■□ 3.11
ABCA6Q8N139 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC34.47■■■■□ 3.11
ABCA6Q8N139 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
ABCA6Q8N139 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC34.46■■■■□ 3.11
ABCA6Q8N139 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC34.46■■■■□ 3.11
ABCA6Q8N139 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
ABCA6Q8N139 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC34.46■■■■□ 3.11
ABCA6Q8N139 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
ABCA6Q8N139 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC34.46■■■■□ 3.11
ABCA6Q8N139 DLX3-202ENST00000512495 834 ntTSL 2 BASIC34.46■■■■□ 3.11
ABCA6Q8N139 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC34.46■■■■□ 3.11
ABCA6Q8N139 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC34.46■■■■□ 3.11
ABCA6Q8N139 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC34.46■■■■□ 3.11
ABCA6Q8N139 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC34.46■■■■□ 3.11
ABCA6Q8N139 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC34.46■■■■□ 3.11
ABCA6Q8N139 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
ABCA6Q8N139 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC34.45■■■■□ 3.11
ABCA6Q8N139 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC34.45■■■■□ 3.11
ABCA6Q8N139 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC34.45■■■■□ 3.11
ABCA6Q8N139 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.1
ABCA6Q8N139 ME3-201ENST00000323418 1068 ntTSL 5 BASIC34.44■■■■□ 3.1
ABCA6Q8N139 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC34.44■■■■□ 3.1
ABCA6Q8N139 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC34.44■■■■□ 3.1
ABCA6Q8N139 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC34.44■■■■□ 3.1
ABCA6Q8N139 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA6Q8N139 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA6Q8N139 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
ABCA6Q8N139 NKILA-201ENST00000613231 537 ntTSL 4 BASIC34.44■■■■□ 3.1
ABCA6Q8N139 TSPY26P-201ENST00000476365 1326 ntBASIC34.44■■■■□ 3.1
ABCA6Q8N139 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
ABCA6Q8N139 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC34.43■■■■□ 3.1
ABCA6Q8N139 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC34.43■■■■□ 3.1
ABCA6Q8N139 AC012414.1-201ENST00000556676 535 ntBASIC34.43■■■■□ 3.1
ABCA6Q8N139 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
ABCA6Q8N139 AC004911.1-201ENST00000416316 871 ntBASIC34.42■■■■□ 3.1
ABCA6Q8N139 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC34.42■■■■□ 3.1
ABCA6Q8N139 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
ABCA6Q8N139 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC34.41■■■■□ 3.1
ABCA6Q8N139 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC34.41■■■■□ 3.1
ABCA6Q8N139 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC34.41■■■■□ 3.1
ABCA6Q8N139 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC34.41■■■■□ 3.1
ABCA6Q8N139 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC34.41■■■■□ 3.1
ABCA6Q8N139 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
ABCA6Q8N139 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
ABCA6Q8N139 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC34.4■■■■□ 3.1
ABCA6Q8N139 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC34.4■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms