Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
SLX4Q8IY92 BX842568.3-201ENST00000418104 571 ntBASIC28.38■■■□□ 2.13
SLX4Q8IY92 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SLX4Q8IY92 DUX4L2-201ENST00000561772 1275 ntBASIC28.38■■■□□ 2.13
SLX4Q8IY92 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SLX4Q8IY92 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.38■■■□□ 2.13
SLX4Q8IY92 DUX4L6-201ENST00000626483 1275 ntBASIC28.38■■■□□ 2.13
SLX4Q8IY92 DUX4L1-201ENST00000627662 1275 ntBASIC28.38■■■□□ 2.13
SLX4Q8IY92 DUX4L8-201ENST00000629013 1275 ntBASIC28.38■■■□□ 2.13
SLX4Q8IY92 DUX4L3-201ENST00000630187 1275 ntBASIC28.38■■■□□ 2.13
SLX4Q8IY92 DUX4L7-201ENST00000630678 1275 ntBASIC28.38■■■□□ 2.13
SLX4Q8IY92 DUX4L5-201ENST00000630834 1275 ntBASIC28.38■■■□□ 2.13
SLX4Q8IY92 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SLX4Q8IY92 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SLX4Q8IY92 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC28.37■■■□□ 2.13
SLX4Q8IY92 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.37■■■□□ 2.13
SLX4Q8IY92 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLX4Q8IY92 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
SLX4Q8IY92 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.37■■■□□ 2.13
SLX4Q8IY92 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLX4Q8IY92 AK1-201ENST00000223836 736 ntTSL 3 BASIC28.36■■■□□ 2.13
SLX4Q8IY92 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
SLX4Q8IY92 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.36■■■□□ 2.13
SLX4Q8IY92 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC28.36■■■□□ 2.13
SLX4Q8IY92 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.36■■■□□ 2.13
SLX4Q8IY92 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SLX4Q8IY92 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SLX4Q8IY92 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.36■■■□□ 2.13
SLX4Q8IY92 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC28.36■■■□□ 2.13
SLX4Q8IY92 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC28.36■■■□□ 2.13
SLX4Q8IY92 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC28.36■■■□□ 2.13
SLX4Q8IY92 AC241377.3-202ENST00000626088 1088 ntBASIC28.36■■■□□ 2.13
SLX4Q8IY92 AC241585.3-202ENST00000628937 1088 ntBASIC28.36■■■□□ 2.13
SLX4Q8IY92 AC245100.8-202ENST00000629247 1058 ntBASIC28.36■■■□□ 2.13
SLX4Q8IY92 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SLX4Q8IY92 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SLX4Q8IY92 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.35■■■□□ 2.13
SLX4Q8IY92 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.35■■■□□ 2.13
SLX4Q8IY92 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.35■■■□□ 2.13
SLX4Q8IY92 MPST-208ENST00000628507 698 ntTSL 5 BASIC28.35■■■□□ 2.13
SLX4Q8IY92 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SLX4Q8IY92 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.35■■■□□ 2.13
SLX4Q8IY92 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SLX4Q8IY92 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
SLX4Q8IY92 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SLX4Q8IY92 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SLX4Q8IY92 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SLX4Q8IY92 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
SLX4Q8IY92 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.34■■■□□ 2.13
SLX4Q8IY92 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
SLX4Q8IY92 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
SLX4Q8IY92 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
SLX4Q8IY92 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.33■■■□□ 2.13
SLX4Q8IY92 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SLX4Q8IY92 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC28.33■■■□□ 2.13
SLX4Q8IY92 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SLX4Q8IY92 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.33■■■□□ 2.13
SLX4Q8IY92 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
SLX4Q8IY92 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SLX4Q8IY92 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SLX4Q8IY92 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.32■■■□□ 2.12
SLX4Q8IY92 AL137784.2-201ENST00000607332 1000 ntBASIC28.32■■■□□ 2.12
SLX4Q8IY92 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SLX4Q8IY92 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SLX4Q8IY92 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SLX4Q8IY92 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
SLX4Q8IY92 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC28.31■■■□□ 2.12
SLX4Q8IY92 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.31■■■□□ 2.12
SLX4Q8IY92 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.31■■■□□ 2.12
SLX4Q8IY92 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.31■■■□□ 2.12
SLX4Q8IY92 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.31■■■□□ 2.12
SLX4Q8IY92 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SLX4Q8IY92 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.31■■■□□ 2.12
SLX4Q8IY92 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
SLX4Q8IY92 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
SLX4Q8IY92 AC027612.3-201ENST00000413684 1047 ntBASIC28.3■■■□□ 2.12
SLX4Q8IY92 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC28.3■■■□□ 2.12
SLX4Q8IY92 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
SLX4Q8IY92 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
SLX4Q8IY92 SLC47A1P1-202ENST00000449666 945 ntBASIC28.29■■■□□ 2.12
SLX4Q8IY92 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLX4Q8IY92 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.29■■■□□ 2.12
SLX4Q8IY92 MIR3181-201ENST00000578512 73 ntBASIC28.29■■■□□ 2.12
SLX4Q8IY92 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.29■■■□□ 2.12
SLX4Q8IY92 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
SLX4Q8IY92 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
SLX4Q8IY92 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
SLX4Q8IY92 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.28■■■□□ 2.12
SLX4Q8IY92 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28.28■■■□□ 2.12
SLX4Q8IY92 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC28.28■■■□□ 2.12
SLX4Q8IY92 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SLX4Q8IY92 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SLX4Q8IY92 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.28■■■□□ 2.12
SLX4Q8IY92 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SLX4Q8IY92 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLX4Q8IY92 YBX1P1-201ENST00000445822 960 ntBASIC28.27■■■□□ 2.12
SLX4Q8IY92 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.27■■■□□ 2.12
SLX4Q8IY92 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC28.27■■■□□ 2.12
SLX4Q8IY92 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLX4Q8IY92 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms