Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF546Q86UE3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF546Q86UE3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF546Q86UE3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ZNF546Q86UE3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.97■□□□□ 0.63
ZNF546Q86UE3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF546Q86UE3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF546Q86UE3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF546Q86UE3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF546Q86UE3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF546Q86UE3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
ZNF546Q86UE3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF546Q86UE3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.97■□□□□ 0.63
ZNF546Q86UE3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF546Q86UE3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ZNF546Q86UE3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF546Q86UE3 ANOS2P-203ENST00000472227 1816 ntBASIC18.97■□□□□ 0.63
ZNF546Q86UE3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF546Q86UE3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF546Q86UE3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF546Q86UE3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ZNF546Q86UE3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF546Q86UE3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF546Q86UE3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF546Q86UE3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF546Q86UE3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF546Q86UE3 AL359504.2-201ENST00000605506 1601 ntBASIC18.95■□□□□ 0.62
ZNF546Q86UE3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF546Q86UE3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF546Q86UE3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF546Q86UE3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF546Q86UE3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ZNF546Q86UE3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF546Q86UE3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF546Q86UE3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF546Q86UE3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF546Q86UE3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF546Q86UE3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ZNF546Q86UE3 AC021231.2-201ENST00000594613 730 ntBASIC18.93■□□□□ 0.62
ZNF546Q86UE3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF546Q86UE3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF546Q86UE3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF546Q86UE3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF546Q86UE3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 DUX4L29-201ENST00000425409 679 ntBASIC18.92■□□□□ 0.62
ZNF546Q86UE3 AL162393.1-201ENST00000437852 946 ntBASIC18.92■□□□□ 0.62
ZNF546Q86UE3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF546Q86UE3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF546Q86UE3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF546Q86UE3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ZNF546Q86UE3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
ZNF546Q86UE3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF546Q86UE3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF546Q86UE3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ZNF546Q86UE3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ZNF546Q86UE3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF546Q86UE3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF546Q86UE3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF546Q86UE3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF546Q86UE3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF546Q86UE3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF546Q86UE3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF546Q86UE3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF546Q86UE3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms