Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DENND4AQ7Z401 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.9■■□□□ 1.42
DENND4AQ7Z401 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DENND4AQ7Z401 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.9■■□□□ 1.42
DENND4AQ7Z401 AL031602.1-201ENST00000633169 911 ntBASIC23.9■■□□□ 1.42
DENND4AQ7Z401 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DENND4AQ7Z401 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
DENND4AQ7Z401 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
DENND4AQ7Z401 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DENND4AQ7Z401 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.9■■□□□ 1.42
DENND4AQ7Z401 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DENND4AQ7Z401 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.9■■□□□ 1.42
DENND4AQ7Z401 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.9■■□□□ 1.42
DENND4AQ7Z401 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.89■■□□□ 1.42
DENND4AQ7Z401 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
DENND4AQ7Z401 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
DENND4AQ7Z401 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.89■■□□□ 1.41
DENND4AQ7Z401 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.89■■□□□ 1.41
DENND4AQ7Z401 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
DENND4AQ7Z401 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
DENND4AQ7Z401 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
DENND4AQ7Z401 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
DENND4AQ7Z401 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DENND4AQ7Z401 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DENND4AQ7Z401 AC027612.3-201ENST00000413684 1047 ntBASIC23.88■■□□□ 1.41
DENND4AQ7Z401 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.88■■□□□ 1.41
DENND4AQ7Z401 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.88■■□□□ 1.41
DENND4AQ7Z401 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.88■■□□□ 1.41
DENND4AQ7Z401 MIR6089-201ENST00000616698 64 ntBASIC23.88■■□□□ 1.41
DENND4AQ7Z401 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.88■■□□□ 1.41
DENND4AQ7Z401 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
DENND4AQ7Z401 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.88■■□□□ 1.41
DENND4AQ7Z401 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DENND4AQ7Z401 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.87■■□□□ 1.41
DENND4AQ7Z401 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
DENND4AQ7Z401 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.87■■□□□ 1.41
DENND4AQ7Z401 AC241377.3-202ENST00000626088 1088 ntBASIC23.87■■□□□ 1.41
DENND4AQ7Z401 AC241585.3-202ENST00000628937 1088 ntBASIC23.87■■□□□ 1.41
DENND4AQ7Z401 AC245100.8-202ENST00000629247 1058 ntBASIC23.87■■□□□ 1.41
DENND4AQ7Z401 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
DENND4AQ7Z401 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
DENND4AQ7Z401 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
DENND4AQ7Z401 RARRES2P11-201ENST00000635158 484 ntBASIC23.87■■□□□ 1.41
DENND4AQ7Z401 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
DENND4AQ7Z401 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
DENND4AQ7Z401 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.86■■□□□ 1.41
DENND4AQ7Z401 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
DENND4AQ7Z401 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.86■■□□□ 1.41
DENND4AQ7Z401 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.86■■□□□ 1.41
DENND4AQ7Z401 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.86■■□□□ 1.41
DENND4AQ7Z401 AC092803.2-201ENST00000564287 1899 ntBASIC23.86■■□□□ 1.41
DENND4AQ7Z401 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
DENND4AQ7Z401 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
DENND4AQ7Z401 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.85■■□□□ 1.41
DENND4AQ7Z401 BX842568.3-201ENST00000418104 571 ntBASIC23.85■■□□□ 1.41
DENND4AQ7Z401 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.85■■□□□ 1.41
DENND4AQ7Z401 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.85■■□□□ 1.41
DENND4AQ7Z401 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DENND4AQ7Z401 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.85■■□□□ 1.41
DENND4AQ7Z401 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
DENND4AQ7Z401 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
DENND4AQ7Z401 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DENND4AQ7Z401 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.84■■□□□ 1.41
DENND4AQ7Z401 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.84■■□□□ 1.41
DENND4AQ7Z401 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.84■■□□□ 1.41
DENND4AQ7Z401 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
DENND4AQ7Z401 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.83■■□□□ 1.41
DENND4AQ7Z401 SLC47A1P1-202ENST00000449666 945 ntBASIC23.83■■□□□ 1.41
DENND4AQ7Z401 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.83■■□□□ 1.41
DENND4AQ7Z401 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.83■■□□□ 1.41
DENND4AQ7Z401 AC233992.3-201ENST00000607491 485 ntBASIC23.83■■□□□ 1.41
DENND4AQ7Z401 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
DENND4AQ7Z401 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
DENND4AQ7Z401 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
DENND4AQ7Z401 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
DENND4AQ7Z401 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
DENND4AQ7Z401 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DENND4AQ7Z401 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
DENND4AQ7Z401 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.83■■□□□ 1.4
DENND4AQ7Z401 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
DENND4AQ7Z401 DUX4L2-201ENST00000561772 1275 ntBASIC23.82■■□□□ 1.4
DENND4AQ7Z401 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.82■■□□□ 1.4
DENND4AQ7Z401 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.82■■□□□ 1.4
DENND4AQ7Z401 AC092437.1-201ENST00000624794 1048 ntBASIC23.82■■□□□ 1.4
DENND4AQ7Z401 DUX4L6-201ENST00000626483 1275 ntBASIC23.82■■□□□ 1.4
DENND4AQ7Z401 DUX4L1-201ENST00000627662 1275 ntBASIC23.82■■□□□ 1.4
DENND4AQ7Z401 DUX4L8-201ENST00000629013 1275 ntBASIC23.82■■□□□ 1.4
DENND4AQ7Z401 DUX4L3-201ENST00000630187 1275 ntBASIC23.82■■□□□ 1.4
DENND4AQ7Z401 DUX4L7-201ENST00000630678 1275 ntBASIC23.82■■□□□ 1.4
DENND4AQ7Z401 DUX4L5-201ENST00000630834 1275 ntBASIC23.82■■□□□ 1.4
DENND4AQ7Z401 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DENND4AQ7Z401 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.81■■□□□ 1.4
DENND4AQ7Z401 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DENND4AQ7Z401 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.81■■□□□ 1.4
DENND4AQ7Z401 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.81■■□□□ 1.4
DENND4AQ7Z401 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
DENND4AQ7Z401 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DENND4AQ7Z401 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DENND4AQ7Z401 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.81■■□□□ 1.4
DENND4AQ7Z401 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms