Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.89■□□□□ 0.77
NLRC3Q7RTR2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC3Q7RTR2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.89■□□□□ 0.77
NLRC3Q7RTR2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.89■□□□□ 0.77
NLRC3Q7RTR2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.89■□□□□ 0.77
NLRC3Q7RTR2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC3Q7RTR2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
NLRC3Q7RTR2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC3Q7RTR2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.89■□□□□ 0.77
NLRC3Q7RTR2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 EP400NL-214ENST00000641289 2402 ntBASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC3Q7RTR2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NLRC3Q7RTR2 KRT8P33-201ENST00000508125 1423 ntBASIC19.87■□□□□ 0.77
NLRC3Q7RTR2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NLRC3Q7RTR2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NLRC3Q7RTR2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.87■□□□□ 0.77
NLRC3Q7RTR2 LONRF2P2-201ENST00000439212 571 ntBASIC19.87■□□□□ 0.77
NLRC3Q7RTR2 RARRES2P1-201ENST00000474487 481 ntBASIC19.87■□□□□ 0.77
NLRC3Q7RTR2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NLRC3Q7RTR2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NLRC3Q7RTR2 ABCB10P4-201ENST00000566803 2184 ntBASIC19.87■□□□□ 0.77
NLRC3Q7RTR2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NLRC3Q7RTR2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NLRC3Q7RTR2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NLRC3Q7RTR2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NLRC3Q7RTR2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NLRC3Q7RTR2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.86■□□□□ 0.77
NLRC3Q7RTR2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NLRC3Q7RTR2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.86■□□□□ 0.77
NLRC3Q7RTR2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NLRC3Q7RTR2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.86■□□□□ 0.77
NLRC3Q7RTR2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.86■□□□□ 0.77
NLRC3Q7RTR2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NLRC3Q7RTR2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NLRC3Q7RTR2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NLRC3Q7RTR2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
NLRC3Q7RTR2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NLRC3Q7RTR2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NLRC3Q7RTR2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NLRC3Q7RTR2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NLRC3Q7RTR2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
NLRC3Q7RTR2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
NLRC3Q7RTR2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NLRC3Q7RTR2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NLRC3Q7RTR2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NLRC3Q7RTR2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
NLRC3Q7RTR2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 AC022616.5-201ENST00000518796 181 ntBASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.84■□□□□ 0.77
NLRC3Q7RTR2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NLRC3Q7RTR2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NLRC3Q7RTR2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NLRC3Q7RTR2 MIR4508-201ENST00000584178 70 ntBASIC19.83■□□□□ 0.77
NLRC3Q7RTR2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.83■□□□□ 0.76
NLRC3Q7RTR2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
NLRC3Q7RTR2 AC004812.2-201ENST00000611079 2094 ntBASIC19.83■□□□□ 0.76
NLRC3Q7RTR2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.83■□□□□ 0.76
NLRC3Q7RTR2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NLRC3Q7RTR2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NLRC3Q7RTR2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.82■□□□□ 0.76
NLRC3Q7RTR2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NLRC3Q7RTR2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NLRC3Q7RTR2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NLRC3Q7RTR2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NLRC3Q7RTR2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NLRC3Q7RTR2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NLRC3Q7RTR2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NLRC3Q7RTR2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NLRC3Q7RTR2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
NLRC3Q7RTR2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC3Q7RTR2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC3Q7RTR2 PVT1_1.1-201ENST00000615125 194 ntBASIC19.81■□□□□ 0.76
NLRC3Q7RTR2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC3Q7RTR2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC3Q7RTR2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC3Q7RTR2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLRC3Q7RTR2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms