Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RFWD3Q6PCD5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
RFWD3Q6PCD5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
RFWD3Q6PCD5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RFWD3Q6PCD5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFWD3Q6PCD5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.82■■□□□ 1.4
RFWD3Q6PCD5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RFWD3Q6PCD5 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.82■■□□□ 1.4
RFWD3Q6PCD5 AC004448.1-201ENST00000458332 883 ntBASIC23.82■■□□□ 1.4
RFWD3Q6PCD5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.82■■□□□ 1.4
RFWD3Q6PCD5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.82■■□□□ 1.4
RFWD3Q6PCD5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.81■■□□□ 1.4
RFWD3Q6PCD5 AP003733.4-201ENST00000623785 1697 ntBASIC23.81■■□□□ 1.4
RFWD3Q6PCD5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.81■■□□□ 1.4
RFWD3Q6PCD5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.81■■□□□ 1.4
RFWD3Q6PCD5 MIR6724-1-201ENST00000616420 92 ntBASIC23.81■■□□□ 1.4
RFWD3Q6PCD5 MIR6724-2-201ENST00000616483 92 ntBASIC23.81■■□□□ 1.4
RFWD3Q6PCD5 MIR6724-4-201ENST00000617390 92 ntBASIC23.81■■□□□ 1.4
RFWD3Q6PCD5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.81■■□□□ 1.4
RFWD3Q6PCD5 MIR6724-3-201ENST00000622482 92 ntBASIC23.81■■□□□ 1.4
RFWD3Q6PCD5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.81■■□□□ 1.4
RFWD3Q6PCD5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RFWD3Q6PCD5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFWD3Q6PCD5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFWD3Q6PCD5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFWD3Q6PCD5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.8■■□□□ 1.4
RFWD3Q6PCD5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.8■■□□□ 1.4
RFWD3Q6PCD5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.8■■□□□ 1.4
RFWD3Q6PCD5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFWD3Q6PCD5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFWD3Q6PCD5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFWD3Q6PCD5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RFWD3Q6PCD5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RFWD3Q6PCD5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.79■■□□□ 1.4
RFWD3Q6PCD5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFWD3Q6PCD5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
RFWD3Q6PCD5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RFWD3Q6PCD5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFWD3Q6PCD5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFWD3Q6PCD5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.79■■□□□ 1.4
RFWD3Q6PCD5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFWD3Q6PCD5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFWD3Q6PCD5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFWD3Q6PCD5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 MIR6722-201ENST00000617286 78 ntBASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.78■■□□□ 1.4
RFWD3Q6PCD5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFWD3Q6PCD5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFWD3Q6PCD5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFWD3Q6PCD5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.77■■□□□ 1.4
RFWD3Q6PCD5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFWD3Q6PCD5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFWD3Q6PCD5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.77■■□□□ 1.4
RFWD3Q6PCD5 AL117332.1-201ENST00000622628 974 ntBASIC23.77■■□□□ 1.4
RFWD3Q6PCD5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFWD3Q6PCD5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RFWD3Q6PCD5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.77■■□□□ 1.4
RFWD3Q6PCD5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.76■■□□□ 1.39
RFWD3Q6PCD5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RFWD3Q6PCD5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RFWD3Q6PCD5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RFWD3Q6PCD5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
RFWD3Q6PCD5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RFWD3Q6PCD5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RFWD3Q6PCD5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RFWD3Q6PCD5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
RFWD3Q6PCD5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.75■■□□□ 1.39
RFWD3Q6PCD5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.75■■□□□ 1.39
RFWD3Q6PCD5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFWD3Q6PCD5 AL022069.1-201ENST00000568025 1636 ntBASIC23.75■■□□□ 1.39
RFWD3Q6PCD5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFWD3Q6PCD5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.75■■□□□ 1.39
RFWD3Q6PCD5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.75■■□□□ 1.39
RFWD3Q6PCD5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFWD3Q6PCD5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFWD3Q6PCD5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFWD3Q6PCD5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RFWD3Q6PCD5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFWD3Q6PCD5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFWD3Q6PCD5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFWD3Q6PCD5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.74■■□□□ 1.39
RFWD3Q6PCD5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.74■■□□□ 1.39
RFWD3Q6PCD5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms