Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HLA-DQA1Q5Y7H0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DQA1Q5Y7H0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.3■■□□□ 1
HLA-DQA1Q5Y7H0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DQA1Q5Y7H0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.3■■□□□ 1
HLA-DQA1Q5Y7H0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.3■■□□□ 1
HLA-DQA1Q5Y7H0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DQA1Q5Y7H0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HLA-DQA1Q5Y7H0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.29■■□□□ 1
HLA-DQA1Q5Y7H0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.29■■□□□ 1
HLA-DQA1Q5Y7H0 LINC00543-201ENST00000567234 1845 ntBASIC21.29■■□□□ 1
HLA-DQA1Q5Y7H0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DQA1Q5Y7H0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DQA1Q5Y7H0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DQA1Q5Y7H0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.28■■□□□ 1
HLA-DQA1Q5Y7H0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DQA1Q5Y7H0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DQA1Q5Y7H0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.28■■□□□ 1
HLA-DQA1Q5Y7H0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DQA1Q5Y7H0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DQA1Q5Y7H0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DQA1Q5Y7H0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DQA1Q5Y7H0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
HLA-DQA1Q5Y7H0 AC010997.5-201ENST00000609182 354 ntBASIC21.28■■□□□ 1
HLA-DQA1Q5Y7H0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DQA1Q5Y7H0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.28■■□□□ 1
HLA-DQA1Q5Y7H0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 KRT16P3-201ENST00000439127 1283 ntBASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.27■■□□□ 1
HLA-DQA1Q5Y7H0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.27■□□□□ 0.99
HLA-DQA1Q5Y7H0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA1Q5Y7H0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA1Q5Y7H0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA1Q5Y7H0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HLA-DQA1Q5Y7H0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA1Q5Y7H0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.26■□□□□ 0.99
HLA-DQA1Q5Y7H0 UNC93B8-201ENST00000511903 705 ntBASIC21.26■□□□□ 0.99
HLA-DQA1Q5Y7H0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.26■□□□□ 0.99
HLA-DQA1Q5Y7H0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA1Q5Y7H0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA1Q5Y7H0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA1Q5Y7H0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 MIR6722-201ENST00000617286 78 ntBASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DQA1Q5Y7H0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.24■□□□□ 0.99
HLA-DQA1Q5Y7H0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
HLA-DQA1Q5Y7H0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQA1Q5Y7H0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQA1Q5Y7H0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQA1Q5Y7H0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
HLA-DQA1Q5Y7H0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.24■□□□□ 0.99
HLA-DQA1Q5Y7H0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQA1Q5Y7H0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQA1Q5Y7H0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQA1Q5Y7H0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQA1Q5Y7H0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQA1Q5Y7H0 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.23■□□□□ 0.99
HLA-DQA1Q5Y7H0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DQA1Q5Y7H0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
HLA-DQA1Q5Y7H0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQA1Q5Y7H0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.23■□□□□ 0.99
HLA-DQA1Q5Y7H0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQA1Q5Y7H0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQA1Q5Y7H0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQA1Q5Y7H0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQA1Q5Y7H0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms