Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNFT1Q5M7Z0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNFT1Q5M7Z0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.74■□□□□ 0.91
RNFT1Q5M7Z0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
RNFT1Q5M7Z0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.74■□□□□ 0.91
RNFT1Q5M7Z0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNFT1Q5M7Z0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.74■□□□□ 0.91
RNFT1Q5M7Z0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNFT1Q5M7Z0 SUDS3P1-201ENST00000505831 966 ntBASIC20.74■□□□□ 0.91
RNFT1Q5M7Z0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNFT1Q5M7Z0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNFT1Q5M7Z0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.74■□□□□ 0.91
RNFT1Q5M7Z0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RNFT1Q5M7Z0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.73■□□□□ 0.91
RNFT1Q5M7Z0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNFT1Q5M7Z0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNFT1Q5M7Z0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
RNFT1Q5M7Z0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNFT1Q5M7Z0 AC142381.2-201ENST00000566120 298 ntBASIC20.73■□□□□ 0.91
RNFT1Q5M7Z0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
RNFT1Q5M7Z0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNFT1Q5M7Z0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNFT1Q5M7Z0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNFT1Q5M7Z0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.73■□□□□ 0.91
RNFT1Q5M7Z0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.72■□□□□ 0.91
RNFT1Q5M7Z0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.72■□□□□ 0.91
RNFT1Q5M7Z0 AC009102.2-201ENST00000606772 1639 ntBASIC20.72■□□□□ 0.91
RNFT1Q5M7Z0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNFT1Q5M7Z0 ZNRF2P3-201ENST00000424200 374 ntBASIC20.72■□□□□ 0.91
RNFT1Q5M7Z0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.72■□□□□ 0.91
RNFT1Q5M7Z0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RNFT1Q5M7Z0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNFT1Q5M7Z0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNFT1Q5M7Z0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNFT1Q5M7Z0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNFT1Q5M7Z0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
RNFT1Q5M7Z0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNFT1Q5M7Z0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNFT1Q5M7Z0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.71■□□□□ 0.91
RNFT1Q5M7Z0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNFT1Q5M7Z0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.71■□□□□ 0.91
RNFT1Q5M7Z0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
RNFT1Q5M7Z0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
RNFT1Q5M7Z0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNFT1Q5M7Z0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.7■□□□□ 0.9
RNFT1Q5M7Z0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNFT1Q5M7Z0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RNFT1Q5M7Z0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.7■□□□□ 0.9
RNFT1Q5M7Z0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNFT1Q5M7Z0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNFT1Q5M7Z0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNFT1Q5M7Z0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNFT1Q5M7Z0 AC022211.4-201ENST00000625094 2161 ntBASIC20.69■□□□□ 0.9
RNFT1Q5M7Z0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNFT1Q5M7Z0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.68■□□□□ 0.9
RNFT1Q5M7Z0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNFT1Q5M7Z0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNFT1Q5M7Z0 EDA-201ENST00000338901 1233 ntBASIC20.68■□□□□ 0.9
RNFT1Q5M7Z0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNFT1Q5M7Z0 AC099791.2-201ENST00000605725 427 ntBASIC20.68■□□□□ 0.9
RNFT1Q5M7Z0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNFT1Q5M7Z0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNFT1Q5M7Z0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNFT1Q5M7Z0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RNFT1Q5M7Z0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNFT1Q5M7Z0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNFT1Q5M7Z0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.67■□□□□ 0.9
RNFT1Q5M7Z0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.67■□□□□ 0.9
RNFT1Q5M7Z0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.67■□□□□ 0.9
RNFT1Q5M7Z0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
RNFT1Q5M7Z0 AL355001.2-201ENST00000620617 1191 ntBASIC20.67■□□□□ 0.9
RNFT1Q5M7Z0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.67■□□□□ 0.9
RNFT1Q5M7Z0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNFT1Q5M7Z0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RNFT1Q5M7Z0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 DUX4L19-201ENST00000557448 1267 ntBASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 SYT6-210ENST00000641643 1587 ntBASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNFT1Q5M7Z0 AC135731.1-201ENST00000569415 2548 ntBASIC20.65■□□□□ 0.9
RNFT1Q5M7Z0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNFT1Q5M7Z0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNFT1Q5M7Z0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNFT1Q5M7Z0 SERBP1P1-201ENST00000396021 1160 ntBASIC20.65■□□□□ 0.9
RNFT1Q5M7Z0 AL136967.2-201ENST00000623968 743 ntBASIC20.65■□□□□ 0.9
RNFT1Q5M7Z0 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.65■□□□□ 0.9
RNFT1Q5M7Z0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNFT1Q5M7Z0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNFT1Q5M7Z0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNFT1Q5M7Z0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms