Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.24■■□□□ 1.31
FNDC3BQ53EP0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FNDC3BQ53EP0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
FNDC3BQ53EP0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.24■■□□□ 1.31
FNDC3BQ53EP0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 AL136162.1-201ENST00000607711 1078 ntBASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FNDC3BQ53EP0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 AC133561.4-201ENST00000566112 224 ntBASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 AC106739.1-201ENST00000617035 715 ntBASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FNDC3BQ53EP0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
FNDC3BQ53EP0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FNDC3BQ53EP0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FNDC3BQ53EP0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 AL161729.1-201ENST00000604104 1402 ntBASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 MIR935-201ENST00000401179 91 ntBASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FNDC3BQ53EP0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.19■■□□□ 1.3
FNDC3BQ53EP0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.19■■□□□ 1.3
FNDC3BQ53EP0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
FNDC3BQ53EP0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FNDC3BQ53EP0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.19■■□□□ 1.3
FNDC3BQ53EP0 AC135279.3-201ENST00000610945 1311 ntBASIC23.18■■□□□ 1.3
FNDC3BQ53EP0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.18■■□□□ 1.3
FNDC3BQ53EP0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.18■■□□□ 1.3
FNDC3BQ53EP0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FNDC3BQ53EP0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FNDC3BQ53EP0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FNDC3BQ53EP0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FNDC3BQ53EP0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
FNDC3BQ53EP0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 AP003733.4-201ENST00000623785 1697 ntBASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FNDC3BQ53EP0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
FNDC3BQ53EP0 AC009102.2-201ENST00000606772 1639 ntBASIC23.16■■□□□ 1.3
FNDC3BQ53EP0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
FNDC3BQ53EP0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.16■■□□□ 1.3
FNDC3BQ53EP0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
FNDC3BQ53EP0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
FNDC3BQ53EP0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
FNDC3BQ53EP0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
FNDC3BQ53EP0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
FNDC3BQ53EP0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
FNDC3BQ53EP0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FNDC3BQ53EP0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FNDC3BQ53EP0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FNDC3BQ53EP0 AC024257.2-201ENST00000549699 147 ntBASIC23.15■■□□□ 1.3
FNDC3BQ53EP0 DUX4L19-201ENST00000557448 1267 ntBASIC23.15■■□□□ 1.3
FNDC3BQ53EP0 AC092171.4-201ENST00000609130 632 ntBASIC23.15■■□□□ 1.3
FNDC3BQ53EP0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FNDC3BQ53EP0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FNDC3BQ53EP0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
FNDC3BQ53EP0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
FNDC3BQ53EP0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
FNDC3BQ53EP0 AC142381.2-201ENST00000566120 298 ntBASIC23.14■■□□□ 1.29
FNDC3BQ53EP0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms