Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 SIT4YDL047W 936 nt6.33□□□□□ -1.4
UBP3Q01477 MRPL7YDR237W 879 nt6.33□□□□□ -1.4
UBP3Q01477 YLR202CYLR202C 327 nt6.33□□□□□ -1.4
UBP3Q01477 NDL1YLR254C 570 nt6.33□□□□□ -1.4
UBP3Q01477 YLR271WYLR271W 825 nt6.33□□□□□ -1.4
UBP3Q01477 YLR326WYLR326W 723 nt6.33□□□□□ -1.4
UBP3Q01477 CAR1YPL111W 1002 nt6.33□□□□□ -1.4
UBP3Q01477 ENV7YPL236C 1095 nt6.33□□□□□ -1.4
UBP3Q01477 MET16YPR167C 786 nt6.33□□□□□ -1.4
UBP3Q01477 TUL1YKL034W 2277 nt6.33□□□□□ -1.4 RIP-Chip
UBP3Q01477 RPE1YJL121C 717 nt6.32□□□□□ -1.4
UBP3Q01477 YAL066WYAL066W 309 nt6.32□□□□□ -1.4
UBP3Q01477 GEP5YLR091W 882 nt6.32□□□□□ -1.4
UBP3Q01477 YBL077WYBL077W 432 nt6.32□□□□□ -1.4
UBP3Q01477 YNR040WYNR040W 771 nt6.32□□□□□ -1.4
UBP3Q01477 UIP4YPL186C 915 nt6.32□□□□□ -1.4
UBP3Q01477 NCE102YPR149W 522 nt6.32□□□□□ -1.4
UBP3Q01477 THI22YPR121W 1719 nt6.32□□□□□ -1.4 RIP-Chip
UBP3Q01477 GPB2YAL056W 2643 nt6.32□□□□□ -1.4 RIP-Chip
UBP3Q01477 KCH1YJR054W 1494 nt6.32□□□□□ -1.4
UBP3Q01477 UTP7YER082C 1665 nt6.32□□□□□ -1.4 RIP-Chip
UBP3Q01477 RAD3YER171W 2337 nt6.32□□□□□ -1.4 RIP-Chip
UBP3Q01477 EIS1YMR031C 2532 nt6.32□□□□□ -1.4
UBP3Q01477 DRN1YGR093W 1524 nt6.31□□□□□ -1.4
UBP3Q01477 YDL022C-AYDL022C-A 249 nt6.31□□□□□ -1.4
UBP3Q01477 YFL012WYFL012W 447 nt6.31□□□□□ -1.4
UBP3Q01477 CIR1YGR207C 786 nt6.31□□□□□ -1.4
UBP3Q01477 ERG20YJL167W 1059 nt6.31□□□□□ -1.4
UBP3Q01477 YKL091CYKL091C 933 nt6.31□□□□□ -1.4
UBP3Q01477 NTR2YKR022C 969 nt6.31□□□□□ -1.4 RIP-Chip
UBP3Q01477 SLZ1YNL196C 897 nt6.31□□□□□ -1.4
UBP3Q01477 UBC11YOR339C 471 nt6.31□□□□□ -1.4
UBP3Q01477 MRP51YPL118W 1035 nt6.31□□□□□ -1.4
UBP3Q01477 TED1YIL039W 1422 nt6.31□□□□□ -1.4
UBP3Q01477 GAS3YMR215W 1575 nt6.31□□□□□ -1.4
UBP3Q01477 COX9YDL067C 180 nt6.3□□□□□ -1.4
UBP3Q01477 YDR109CYDR109C 2148 nt6.3□□□□□ -1.4
UBP3Q01477 YDR282CYDR282C 1245 nt6.3□□□□□ -1.4 RIP-Chip
UBP3Q01477 SUP19tS(UGA)E 82 nt6.3□□□□□ -1.4
UBP3Q01477 SUP17tS(UGA)I 82 nt6.3□□□□□ -1.4
UBP3Q01477 SUP16tS(UGA)P 82 nt6.3□□□□□ -1.4
UBP3Q01477 SUP2tY(GUA)D 75 nt6.3□□□□□ -1.4
UBP3Q01477 SUP11tY(GUA)F1 75 nt6.3□□□□□ -1.4
UBP3Q01477 SUP6tY(GUA)F2 75 nt6.3□□□□□ -1.4
UBP3Q01477 SUP7tY(GUA)J1 75 nt6.3□□□□□ -1.4
UBP3Q01477 SUP4tY(GUA)J2 75 nt6.3□□□□□ -1.4
UBP3Q01477 SUP5tY(GUA)M1 75 nt6.3□□□□□ -1.4
UBP3Q01477 SUP8tY(GUA)M2 75 nt6.3□□□□□ -1.4
UBP3Q01477 SUP3tY(GUA)O 75 nt6.3□□□□□ -1.4
UBP3Q01477 MRS1YIR021W 1092 nt6.3□□□□□ -1.4
UBP3Q01477 YJU3YKL094W 942 nt6.3□□□□□ -1.4
UBP3Q01477 YML6YML025C 861 nt6.3□□□□□ -1.4
UBP3Q01477 YIM2YMR151W 438 nt6.3□□□□□ -1.4
UBP3Q01477 YOR008W-BYOR008W-B 102 nt6.3□□□□□ -1.4
UBP3Q01477 ALT1YLR089C 1779 nt6.3□□□□□ -1.4
UBP3Q01477 FLC3YGL139W 2409 nt6.3□□□□□ -1.4 RIP-Chip
UBP3Q01477 STB5YHR178W 2232 nt6.3□□□□□ -1.4
UBP3Q01477 ABZ1YNR033W 2364 nt6.3□□□□□ -1.4
UBP3Q01477 CUS1YMR240C 1311 nt6.29□□□□□ -1.4 RIP-Chip
UBP3Q01477 APE3YBR286W 1614 nt6.29□□□□□ -1.4 RIP-Chip
UBP3Q01477 MTC5YDR128W 3447 nt6.29□□□□□ -1.4 RIP-Chip
UBP3Q01477 GIC2YDR309C 1152 nt6.29□□□□□ -1.4
UBP3Q01477 HIM1YDR317W 1245 nt6.29□□□□□ -1.4 RIP-Chip
UBP3Q01477 ERG25YGR060W 930 nt6.29□□□□□ -1.4 RIP-Chip
UBP3Q01477 DBF2YGR092W 1719 nt6.29□□□□□ -1.4 RIP-Chip
UBP3Q01477 CLC1YGR167W 702 nt6.29□□□□□ -1.4
UBP3Q01477 PCT1YGR202C 1275 nt6.29□□□□□ -1.4
UBP3Q01477 PRI2YKL045W 1587 nt6.29□□□□□ -1.4
UBP3Q01477 RHO4YKR055W 876 nt6.29□□□□□ -1.4
UBP3Q01477 MEC3YLR288C 1425 nt6.29□□□□□ -1.4
UBP3Q01477 ORM2YLR350W 651 nt6.29□□□□□ -1.4
UBP3Q01477 YML012C-AYML012C-A 378 nt6.29□□□□□ -1.4
UBP3Q01477 FAT3YKL187C 2253 nt6.29□□□□□ -1.4
UBP3Q01477 SIR1YKR101W 1965 nt6.29□□□□□ -1.4
UBP3Q01477 ZRC1YMR243C 1329 nt6.28□□□□□ -1.4
UBP3Q01477 UGX2YDL169C 672 nt6.28□□□□□ -1.4
UBP3Q01477 POP6YGR030C 477 nt6.28□□□□□ -1.4
UBP3Q01477 YUH1YJR099W 711 nt6.28□□□□□ -1.4
UBP3Q01477 LAC1YKL008C 1257 nt6.28□□□□□ -1.4
UBP3Q01477 TAL1YLR354C 1008 nt6.28□□□□□ -1.4
UBP3Q01477 YMR181CYMR181C 465 nt6.28□□□□□ -1.4
UBP3Q01477 RMI1YPL024W 726 nt6.28□□□□□ -1.4 RIP-Chip
UBP3Q01477 ATG12YBR217W 561 nt6.28□□□□□ -1.4
UBP3Q01477 MRPS5YBR251W 924 nt6.28□□□□□ -1.4
UBP3Q01477 ESC2YDR363W 1371 nt6.28□□□□□ -1.4
UBP3Q01477 YDR034C-CYDR034C-C 1317 nt6.27□□□□□ -1.41
UBP3Q01477 YLR410W-AYLR410W-A 1317 nt6.27□□□□□ -1.41
UBP3Q01477 ARB1YER036C 1833 nt6.27□□□□□ -1.41 RIP-Chip
UBP3Q01477 HST1YOL068C 1512 nt6.27□□□□□ -1.41
UBP3Q01477 PRR2YDL214C 2100 nt6.27□□□□□ -1.41 RIP-Chip
UBP3Q01477 URA3YEL021W 804 nt6.27□□□□□ -1.41
UBP3Q01477 YHR028W-AYHR028W-A 321 nt6.27□□□□□ -1.41
UBP3Q01477 VMA4YOR332W 702 nt6.27□□□□□ -1.41
UBP3Q01477 SMA1YPL027W 738 nt6.27□□□□□ -1.41
UBP3Q01477 SRB6YBR253W 366 nt6.27□□□□□ -1.41 RIP-Chip
UBP3Q01477 EKI1YDR147W 1605 nt6.27□□□□□ -1.41
UBP3Q01477 GPA2YER020W 1350 nt6.27□□□□□ -1.41 RIP-Chip
UBP3Q01477 NOT3YIL038C 2511 nt6.27□□□□□ -1.41
UBP3Q01477 ERG7YHR072W 2196 nt6.26□□□□□ -1.41
UBP3Q01477 YCR100CYCR100C 951 nt6.26□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 54.7 ms