Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NKX6-1P78426 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX6-1P78426 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX6-1P78426 PBX2P1-201ENST00000493219 1291 ntBASIC20.03■□□□□ 0.8
NKX6-1P78426 RARRES2P6-201ENST00000567333 442 ntBASIC20.03■□□□□ 0.8
NKX6-1P78426 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX6-1P78426 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
NKX6-1P78426 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.02■□□□□ 0.8
NKX6-1P78426 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX6-1P78426 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX6-1P78426 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX6-1P78426 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.02■□□□□ 0.8
NKX6-1P78426 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NKX6-1P78426 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX6-1P78426 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX6-1P78426 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX6-1P78426 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.02■□□□□ 0.8
NKX6-1P78426 ZNRF2P3-201ENST00000424200 374 ntBASIC20.02■□□□□ 0.8
NKX6-1P78426 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX6-1P78426 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.02■□□□□ 0.8
NKX6-1P78426 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.02■□□□□ 0.8
NKX6-1P78426 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.02■□□□□ 0.8
NKX6-1P78426 AC142381.2-201ENST00000566120 298 ntBASIC20.02■□□□□ 0.8
NKX6-1P78426 AL512631.2-201ENST00000604634 923 ntBASIC20.02■□□□□ 0.8
NKX6-1P78426 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX6-1P78426 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX6-1P78426 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NKX6-1P78426 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
NKX6-1P78426 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
NKX6-1P78426 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.02■□□□□ 0.79
NKX6-1P78426 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.02■□□□□ 0.79
NKX6-1P78426 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX6-1P78426 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX6-1P78426 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.01■□□□□ 0.79
NKX6-1P78426 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
NKX6-1P78426 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX6-1P78426 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NKX6-1P78426 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX6-1P78426 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
NKX6-1P78426 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20■□□□□ 0.79
NKX6-1P78426 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NKX6-1P78426 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NKX6-1P78426 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NKX6-1P78426 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20■□□□□ 0.79
NKX6-1P78426 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20■□□□□ 0.79
NKX6-1P78426 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20■□□□□ 0.79
NKX6-1P78426 AC106739.1-201ENST00000617035 715 ntBASIC20■□□□□ 0.79
NKX6-1P78426 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20■□□□□ 0.79
NKX6-1P78426 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NKX6-1P78426 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NKX6-1P78426 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20■□□□□ 0.79
NKX6-1P78426 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20■□□□□ 0.79
NKX6-1P78426 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NKX6-1P78426 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX6-1P78426 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.99■□□□□ 0.79
NKX6-1P78426 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.99■□□□□ 0.79
NKX6-1P78426 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.99■□□□□ 0.79
NKX6-1P78426 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.99■□□□□ 0.79
NKX6-1P78426 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX6-1P78426 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NKX6-1P78426 AC022211.4-201ENST00000625094 2161 ntBASIC19.98■□□□□ 0.79
NKX6-1P78426 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX6-1P78426 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX6-1P78426 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
NKX6-1P78426 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.98■□□□□ 0.79
NKX6-1P78426 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NKX6-1P78426 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX6-1P78426 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX6-1P78426 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX6-1P78426 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NKX6-1P78426 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NKX6-1P78426 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NKX6-1P78426 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NKX6-1P78426 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NKX6-1P78426 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX6-1P78426 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX6-1P78426 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX6-1P78426 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX6-1P78426 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX6-1P78426 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NKX6-1P78426 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NKX6-1P78426 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
NKX6-1P78426 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX6-1P78426 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX6-1P78426 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX6-1P78426 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX6-1P78426 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
NKX6-1P78426 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX6-1P78426 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.96■□□□□ 0.79
NKX6-1P78426 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NKX6-1P78426 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX6-1P78426 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NKX6-1P78426 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.95■□□□□ 0.78
NKX6-1P78426 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NKX6-1P78426 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX6-1P78426 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX6-1P78426 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NKX6-1P78426 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NKX6-1P78426 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX6-1P78426 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms