Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VSX2P58304 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VSX2P58304 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VSX2P58304 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.9■■□□□ 1.1
VSX2P58304 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.89■■□□□ 1.1
VSX2P58304 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VSX2P58304 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VSX2P58304 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
VSX2P58304 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VSX2P58304 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.89■■□□□ 1.09
VSX2P58304 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.89■■□□□ 1.09
VSX2P58304 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
VSX2P58304 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.89■■□□□ 1.09
VSX2P58304 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.89■■□□□ 1.09
VSX2P58304 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VSX2P58304 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
VSX2P58304 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.88■■□□□ 1.09
VSX2P58304 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VSX2P58304 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
VSX2P58304 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.88■■□□□ 1.09
VSX2P58304 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.88■■□□□ 1.09
VSX2P58304 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.88■■□□□ 1.09
VSX2P58304 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.88■■□□□ 1.09
VSX2P58304 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VSX2P58304 AL117332.1-201ENST00000622628 974 ntBASIC21.88■■□□□ 1.09
VSX2P58304 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.88■■□□□ 1.09
VSX2P58304 AL161729.1-201ENST00000604104 1402 ntBASIC21.88■■□□□ 1.09
VSX2P58304 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VSX2P58304 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.87■■□□□ 1.09
VSX2P58304 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.87■■□□□ 1.09
VSX2P58304 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VSX2P58304 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VSX2P58304 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
VSX2P58304 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.87■■□□□ 1.09
VSX2P58304 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.87■■□□□ 1.09
VSX2P58304 AL356740.2-201ENST00000601559 647 ntBASIC21.87■■□□□ 1.09
VSX2P58304 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.87■■□□□ 1.09
VSX2P58304 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VSX2P58304 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
VSX2P58304 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VSX2P58304 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
VSX2P58304 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.86■■□□□ 1.09
VSX2P58304 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.86■■□□□ 1.09
VSX2P58304 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.86■■□□□ 1.09
VSX2P58304 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VSX2P58304 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VSX2P58304 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
VSX2P58304 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
VSX2P58304 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VSX2P58304 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VSX2P58304 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.85■■□□□ 1.09
VSX2P58304 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.85■■□□□ 1.09
VSX2P58304 MIR3621-201ENST00000580529 85 ntBASIC21.85■■□□□ 1.09
VSX2P58304 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.85■■□□□ 1.09
VSX2P58304 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.85■■□□□ 1.09
VSX2P58304 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.85■■□□□ 1.09
VSX2P58304 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VSX2P58304 LINC01124-201ENST00000409786 2117 ntBASIC21.85■■□□□ 1.09
VSX2P58304 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VSX2P58304 AC005703.6-201ENST00000623265 1329 ntBASIC21.84■■□□□ 1.09
VSX2P58304 AL139125.2-201ENST00000623134 1869 ntBASIC21.84■■□□□ 1.09
VSX2P58304 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VSX2P58304 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.84■■□□□ 1.09
VSX2P58304 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.84■■□□□ 1.09
VSX2P58304 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VSX2P58304 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VSX2P58304 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VSX2P58304 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.83■■□□□ 1.09
VSX2P58304 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
VSX2P58304 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
VSX2P58304 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.82■■□□□ 1.08
VSX2P58304 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.82■■□□□ 1.08
VSX2P58304 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.82■■□□□ 1.08
VSX2P58304 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.82■■□□□ 1.08
VSX2P58304 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.82■■□□□ 1.08
VSX2P58304 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
VSX2P58304 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
VSX2P58304 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
VSX2P58304 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.82■■□□□ 1.08
VSX2P58304 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VSX2P58304 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VSX2P58304 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
VSX2P58304 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VSX2P58304 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VSX2P58304 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
VSX2P58304 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VSX2P58304 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VSX2P58304 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.81■■□□□ 1.08
VSX2P58304 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.81■■□□□ 1.08
VSX2P58304 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VSX2P58304 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
VSX2P58304 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VSX2P58304 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.8■■□□□ 1.08
VSX2P58304 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
VSX2P58304 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VSX2P58304 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.8■■□□□ 1.08
VSX2P58304 AC008406.3-201ENST00000620001 1374 ntBASIC21.8■■□□□ 1.08
VSX2P58304 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
VSX2P58304 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VSX2P58304 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms