Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN17P56750 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN17P56750 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN17P56750 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CLDN17P56750 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN17P56750 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.39■□□□□ 0.85
CLDN17P56750 AC004448.1-201ENST00000458332 883 ntBASIC20.39■□□□□ 0.85
CLDN17P56750 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN17P56750 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN17P56750 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN17P56750 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN17P56750 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN17P56750 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CLDN17P56750 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN17P56750 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN17P56750 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN17P56750 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN17P56750 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN17P56750 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN17P56750 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN17P56750 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN17P56750 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN17P56750 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN17P56750 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN17P56750 SNX5-217ENST00000606557 1087 ntBASIC20.37■□□□□ 0.85
CLDN17P56750 MIR4787-201ENST00000607364 84 ntBASIC20.37■□□□□ 0.85
CLDN17P56750 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN17P56750 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN17P56750 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.37■□□□□ 0.85
CLDN17P56750 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN17P56750 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN17P56750 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN17P56750 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLDN17P56750 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLDN17P56750 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.36■□□□□ 0.85
CLDN17P56750 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.36■□□□□ 0.85
CLDN17P56750 AL035685.1-201ENST00000636663 812 ntBASIC20.36■□□□□ 0.85
CLDN17P56750 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.36■□□□□ 0.85
CLDN17P56750 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CLDN17P56750 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN17P56750 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN17P56750 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN17P56750 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN17P56750 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN17P56750 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN17P56750 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN17P56750 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN17P56750 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN17P56750 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN17P56750 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN17P56750 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CLDN17P56750 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLDN17P56750 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLDN17P56750 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLDN17P56750 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN17P56750 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN17P56750 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN17P56750 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN17P56750 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN17P56750 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.34■□□□□ 0.85
CLDN17P56750 AC092028.1-203ENST00000608262 953 ntBASIC20.34■□□□□ 0.85
CLDN17P56750 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN17P56750 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
CLDN17P56750 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN17P56750 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN17P56750 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN17P56750 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN17P56750 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN17P56750 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CLDN17P56750 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN17P56750 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN17P56750 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN17P56750 ALDH1A3-203ENST00000557963 1670 ntBASIC20.33■□□□□ 0.85
CLDN17P56750 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN17P56750 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN17P56750 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.33■□□□□ 0.85
CLDN17P56750 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CLDN17P56750 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN17P56750 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN17P56750 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN17P56750 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN17P56750 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN17P56750 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.33■□□□□ 0.84
CLDN17P56750 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLDN17P56750 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN17P56750 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN17P56750 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN17P56750 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN17P56750 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN17P56750 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN17P56750 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN17P56750 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN17P56750 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN17P56750 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN17P56750 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN17P56750 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN17P56750 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN17P56750 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN17P56750 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN17P56750 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms