Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.47■■□□□ 1.19
CLCNKAP51800 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.47■■□□□ 1.19
CLCNKAP51800 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.47■■□□□ 1.19
CLCNKAP51800 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.47■■□□□ 1.19
CLCNKAP51800 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.47■■□□□ 1.19
CLCNKAP51800 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
CLCNKAP51800 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCNKAP51800 AC005703.6-201ENST00000623265 1329 ntBASIC22.47■■□□□ 1.19
CLCNKAP51800 AC008406.3-201ENST00000620001 1374 ntBASIC22.47■■□□□ 1.19
CLCNKAP51800 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCNKAP51800 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.46■■□□□ 1.19
CLCNKAP51800 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.46■■□□□ 1.19
CLCNKAP51800 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCNKAP51800 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.46■■□□□ 1.19
CLCNKAP51800 AC131281.2-201ENST00000520478 145 ntBASIC22.46■■□□□ 1.19
CLCNKAP51800 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCNKAP51800 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CLCNKAP51800 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.46■■□□□ 1.19
CLCNKAP51800 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.46■■□□□ 1.19
CLCNKAP51800 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLCNKAP51800 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCNKAP51800 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCNKAP51800 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
CLCNKAP51800 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLCNKAP51800 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.45■■□□□ 1.18
CLCNKAP51800 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLCNKAP51800 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.45■■□□□ 1.18
CLCNKAP51800 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.45■■□□□ 1.18
CLCNKAP51800 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.45■■□□□ 1.18
CLCNKAP51800 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.45■■□□□ 1.18
CLCNKAP51800 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLCNKAP51800 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.45■■□□□ 1.18
CLCNKAP51800 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLCNKAP51800 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.45■■□□□ 1.18
CLCNKAP51800 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLCNKAP51800 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCNKAP51800 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLCNKAP51800 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.44■■□□□ 1.18
CLCNKAP51800 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.44■■□□□ 1.18
CLCNKAP51800 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.44■■□□□ 1.18
CLCNKAP51800 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLCNKAP51800 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLCNKAP51800 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLCNKAP51800 AL512631.2-201ENST00000604634 923 ntBASIC22.43■■□□□ 1.18
CLCNKAP51800 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLCNKAP51800 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.43■■□□□ 1.18
CLCNKAP51800 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLCNKAP51800 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLCNKAP51800 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCNKAP51800 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.42■■□□□ 1.18
CLCNKAP51800 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.42■■□□□ 1.18
CLCNKAP51800 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CLCNKAP51800 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCNKAP51800 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.42■■□□□ 1.18
CLCNKAP51800 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.42■■□□□ 1.18
CLCNKAP51800 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CLCNKAP51800 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CLCNKAP51800 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.41■■□□□ 1.18
CLCNKAP51800 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.41■■□□□ 1.18
CLCNKAP51800 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.41■■□□□ 1.18
CLCNKAP51800 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCNKAP51800 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCNKAP51800 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CLCNKAP51800 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLCNKAP51800 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CLCNKAP51800 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLCNKAP51800 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLCNKAP51800 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLCNKAP51800 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CLCNKAP51800 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CLCNKAP51800 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLCNKAP51800 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLCNKAP51800 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLCNKAP51800 LINC01124-201ENST00000409786 2117 ntBASIC22.4■■□□□ 1.18
CLCNKAP51800 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLCNKAP51800 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CLCNKAP51800 AL139125.2-201ENST00000623134 1869 ntBASIC22.39■■□□□ 1.18
CLCNKAP51800 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.39■■□□□ 1.17
CLCNKAP51800 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLCNKAP51800 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.38■■□□□ 1.17
CLCNKAP51800 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLCNKAP51800 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.38■■□□□ 1.17
CLCNKAP51800 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.38■■□□□ 1.17
CLCNKAP51800 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLCNKAP51800 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLCNKAP51800 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLCNKAP51800 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLCNKAP51800 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.38■■□□□ 1.17
CLCNKAP51800 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLCNKAP51800 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CLCNKAP51800 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLCNKAP51800 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLCNKAP51800 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLCNKAP51800 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CLCNKAP51800 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CLCNKAP51800 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.37■■□□□ 1.17
CLCNKAP51800 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.37■■□□□ 1.17
CLCNKAP51800 MIR4466-201ENST00000606121 54 ntBASIC22.37■■□□□ 1.17
CLCNKAP51800 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLCNKAP51800 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms