Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS3P49746 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS3P49746 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.8■□□□□ 0.6
THBS3P49746 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS3P49746 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
THBS3P49746 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS3P49746 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS3P49746 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS3P49746 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
THBS3P49746 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS3P49746 LONRF2P2-201ENST00000439212 571 ntBASIC18.79■□□□□ 0.6
THBS3P49746 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
THBS3P49746 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.79■□□□□ 0.6
THBS3P49746 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
THBS3P49746 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS3P49746 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THBS3P49746 AL161729.1-201ENST00000604104 1402 ntBASIC18.78■□□□□ 0.6
THBS3P49746 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.78■□□□□ 0.6
THBS3P49746 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS3P49746 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THBS3P49746 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.78■□□□□ 0.6
THBS3P49746 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THBS3P49746 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS3P49746 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS3P49746 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
THBS3P49746 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
THBS3P49746 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.77■□□□□ 0.6
THBS3P49746 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.77■□□□□ 0.6
THBS3P49746 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS3P49746 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.77■□□□□ 0.6
THBS3P49746 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS3P49746 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS3P49746 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.76■□□□□ 0.59
THBS3P49746 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS3P49746 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
THBS3P49746 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.76■□□□□ 0.59
THBS3P49746 AC010980.1-201ENST00000587192 1142 ntBASIC18.76■□□□□ 0.59
THBS3P49746 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.76■□□□□ 0.59
THBS3P49746 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS3P49746 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS3P49746 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.76■□□□□ 0.59
THBS3P49746 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
THBS3P49746 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.75■□□□□ 0.59
THBS3P49746 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
THBS3P49746 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
THBS3P49746 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
THBS3P49746 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
THBS3P49746 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THBS3P49746 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
THBS3P49746 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.75■□□□□ 0.59
THBS3P49746 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
THBS3P49746 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THBS3P49746 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
THBS3P49746 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.74■□□□□ 0.59
THBS3P49746 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.74■□□□□ 0.59
THBS3P49746 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.74■□□□□ 0.59
THBS3P49746 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.74■□□□□ 0.59
THBS3P49746 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.74■□□□□ 0.59
THBS3P49746 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
THBS3P49746 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
THBS3P49746 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
THBS3P49746 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS3P49746 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THBS3P49746 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS3P49746 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
THBS3P49746 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THBS3P49746 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS3P49746 AC011551.1-201ENST00000614101 683 ntBASIC18.73■□□□□ 0.59
THBS3P49746 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS3P49746 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS3P49746 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS3P49746 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THBS3P49746 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.73■□□□□ 0.59
THBS3P49746 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THBS3P49746 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
THBS3P49746 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THBS3P49746 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
THBS3P49746 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.72■□□□□ 0.59
THBS3P49746 AC022616.5-201ENST00000518796 181 ntBASIC18.72■□□□□ 0.59
THBS3P49746 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THBS3P49746 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THBS3P49746 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
THBS3P49746 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
THBS3P49746 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THBS3P49746 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THBS3P49746 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THBS3P49746 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms