Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COPB2P35606 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.3■■□□□ 1.8
COPB2P35606 MIR939-201ENST00000401314 82 ntBASIC26.3■■□□□ 1.8
COPB2P35606 AF213884.3-201ENST00000563833 479 ntBASIC26.3■■□□□ 1.8
COPB2P35606 AL136967.2-201ENST00000623968 743 ntBASIC26.3■■□□□ 1.8
COPB2P35606 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COPB2P35606 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COPB2P35606 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COPB2P35606 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.29■■□□□ 1.8
COPB2P35606 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.29■■□□□ 1.8
COPB2P35606 RARRES2P6-201ENST00000567333 442 ntBASIC26.29■■□□□ 1.8
COPB2P35606 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.29■■□□□ 1.8
COPB2P35606 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
COPB2P35606 AC091305.1-201ENST00000479476 895 ntBASIC26.28■■□□□ 1.8
COPB2P35606 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.28■■□□□ 1.8
COPB2P35606 AP001330.3-201ENST00000520123 633 ntBASIC26.28■■□□□ 1.8
COPB2P35606 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.28■■□□□ 1.8
COPB2P35606 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.28■■□□□ 1.8
COPB2P35606 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.28■■□□□ 1.8
COPB2P35606 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
COPB2P35606 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COPB2P35606 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.28■■□□□ 1.8
COPB2P35606 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.27■■□□□ 1.8
COPB2P35606 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COPB2P35606 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COPB2P35606 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.27■■□□□ 1.8
COPB2P35606 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
COPB2P35606 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.27■■□□□ 1.8
COPB2P35606 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
COPB2P35606 AC011298.3-201ENST00000615796 283 ntBASIC26.27■■□□□ 1.8
COPB2P35606 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
COPB2P35606 AC009102.2-201ENST00000606772 1639 ntBASIC26.27■■□□□ 1.8
COPB2P35606 AC145676.1-201ENST00000514988 2004 ntBASIC26.27■■□□□ 1.8
COPB2P35606 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.27■■□□□ 1.8
COPB2P35606 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COPB2P35606 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COPB2P35606 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COPB2P35606 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
COPB2P35606 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COPB2P35606 SERBP1P1-201ENST00000396021 1160 ntBASIC26.26■■□□□ 1.79
COPB2P35606 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.26■■□□□ 1.79
COPB2P35606 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
COPB2P35606 AC241377.3-202ENST00000626088 1088 ntBASIC26.26■■□□□ 1.79
COPB2P35606 AC241585.3-202ENST00000628937 1088 ntBASIC26.26■■□□□ 1.79
COPB2P35606 AC245100.8-202ENST00000629247 1058 ntBASIC26.26■■□□□ 1.79
COPB2P35606 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.26■■□□□ 1.79
COPB2P35606 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COPB2P35606 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
COPB2P35606 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COPB2P35606 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.25■■□□□ 1.79
COPB2P35606 AC105265.2-201ENST00000467189 838 ntBASIC26.25■■□□□ 1.79
COPB2P35606 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.25■■□□□ 1.79
COPB2P35606 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.25■■□□□ 1.79
COPB2P35606 MIR4767-201ENST00000582827 78 ntBASIC26.25■■□□□ 1.79
COPB2P35606 AC099791.2-201ENST00000605725 427 ntBASIC26.25■■□□□ 1.79
COPB2P35606 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
COPB2P35606 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COPB2P35606 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COPB2P35606 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COPB2P35606 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COPB2P35606 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.23■■□□□ 1.79
COPB2P35606 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COPB2P35606 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COPB2P35606 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.23■■□□□ 1.79
COPB2P35606 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.23■■□□□ 1.79
COPB2P35606 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.23■■□□□ 1.79
COPB2P35606 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
COPB2P35606 C17orf82-201ENST00000623772 1530 ntBASIC26.23■■□□□ 1.79
COPB2P35606 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COPB2P35606 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COPB2P35606 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COPB2P35606 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.22■■□□□ 1.79
COPB2P35606 AC135731.1-201ENST00000569415 2548 ntBASIC26.22■■□□□ 1.79
COPB2P35606 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COPB2P35606 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.22■■□□□ 1.79
COPB2P35606 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.22■■□□□ 1.79
COPB2P35606 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COPB2P35606 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COPB2P35606 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COPB2P35606 AC091060.1-201ENST00000623524 1766 ntBASIC26.21■■□□□ 1.79
COPB2P35606 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COPB2P35606 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COPB2P35606 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
COPB2P35606 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
COPB2P35606 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.2■■□□□ 1.79
COPB2P35606 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
COPB2P35606 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
COPB2P35606 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.2■■□□□ 1.78
COPB2P35606 AC026271.2-201ENST00000428091 497 ntBASIC26.2■■□□□ 1.78
COPB2P35606 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.2■■□□□ 1.78
COPB2P35606 AC027682.1-201ENST00000562846 899 ntBASIC26.2■■□□□ 1.78
COPB2P35606 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COPB2P35606 RASA4CP-201ENST00000424092 1398 ntBASIC26.2■■□□□ 1.78
COPB2P35606 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.2■■□□□ 1.78
COPB2P35606 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COPB2P35606 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
COPB2P35606 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COPB2P35606 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COPB2P35606 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COPB2P35606 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms