Protein–RNA interactions for Protein: P32842

VMA11, V-type proton ATPase subunit c', yeast

Predictions only

Length 164 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	P32842	GLT1	YDL171C	6438 nt		4.01	□□□□□ -1.77
VMA11	P32842	ZUO1	YGR285C	1302 nt		4.01	□□□□□ -1.77
VMA11	P32842	NUP116	YMR047C	3342 nt		4.01	□□□□□ -1.77
VMA11	P32842	YGR016W	YGR016W	573 nt		4.01	□□□□□ -1.77
VMA11	P32842	MTW1	YAL034W-A	870 nt		4.01	□□□□□ -1.77
VMA11	P32842	ARG8	YOL140W	1272 nt		4.01	□□□□□ -1.77
VMA11	P32842	CUE5	YOR042W	1236 nt		4.01	□□□□□ -1.77
VMA11	P32842	YJR124C	YJR124C	1347 nt		4	□□□□□ -1.77
VMA11	P32842	HES1	YOR237W	1305 nt		4	□□□□□ -1.77
VMA11	P32842	MSE1	YOL033W	1611 nt		4	□□□□□ -1.77
VMA11	P32842	PEX7	YDR142C	1128 nt		4	□□□□□ -1.77
VMA11	P32842	PDR10	YOR328W	4695 nt		4	□□□□□ -1.77
VMA11	P32842	MCH4	YOL119C	1506 nt		4	□□□□□ -1.77
VMA11	P32842	FUI1	YBL042C	1920 nt		3.99	□□□□□ -1.77
VMA11	P32842	GIP1	YBR045C	1920 nt		3.99	□□□□□ -1.77
VMA11	P32842	BIT2	YBR270C	1638 nt		3.99	□□□□□ -1.77
VMA11	P32842	HPC2	YBR215W	1878 nt		3.99	□□□□□ -1.77
VMA11	P32842	YAP1802	YGR241C	1707 nt		3.99	□□□□□ -1.77
VMA11	P32842	YJL107C	YJL107C	1164 nt		3.99	□□□□□ -1.77
VMA11	P32842	KRE9	YJL174W	831 nt		3.99	□□□□□ -1.77
VMA11	P32842	CDC21	YOR074C	915 nt		3.99	□□□□□ -1.77
VMA11	P32842	NHP6A	YPR052C	282 nt		3.99	□□□□□ -1.77
VMA11	P32842	VHS1	YDR247W	1386 nt		3.99	□□□□□ -1.77
VMA11	P32842	PRM1	YNL279W	1986 nt		3.98	□□□□□ -1.77
VMA11	P32842	RPL34A	YER056C-A	366 nt		3.98	□□□□□ -1.77
VMA11	P32842	YIL171W-A	YIL171W-A	453 nt		3.98	□□□□□ -1.77
VMA11	P32842	YJL220W	YJL220W	453 nt		3.98	□□□□□ -1.77
VMA11	P32842	XPT1	YJR133W	630 nt		3.98	□□□□□ -1.77
VMA11	P32842	MID2	YLR332W	1131 nt		3.98	□□□□□ -1.77
VMA11	P32842	MRPL39	YML009C	213 nt		3.98	□□□□□ -1.77
VMA11	P32842	ISU2	YOR226C	471 nt		3.98	□□□□□ -1.77
VMA11	P32842	PAL1	YDR348C	1500 nt		3.98	□□□□□ -1.77
VMA11	P32842	RIM15	YFL033C	5313 nt		3.98	□□□□□ -1.77
VMA11	P32842	AIM10	YER087W	1731 nt		3.98	□□□□□ -1.77
VMA11	P32842	ATM1	YMR301C	2073 nt		3.98	□□□□□ -1.77
VMA11	P32842	VHC1	YBR235W	3363 nt		3.97	□□□□□ -1.77
VMA11	P32842	CAF4	YKR036C	1932 nt		3.97	□□□□□ -1.77
VMA11	P32842	MEC3	YLR288C	1425 nt		3.97	□□□□□ -1.77
VMA11	P32842	PUS1	YPL212C	1635 nt		3.97	□□□□□ -1.77
VMA11	P32842	NOP16	YER002W	696 nt		3.97	□□□□□ -1.77
VMA11	P32842	RPP0	YLR340W	939 nt		3.97	□□□□□ -1.77
VMA11	P32842	YIF1	YNL263C	945 nt		3.97	□□□□□ -1.77
VMA11	P32842	TRM10	YOL093W	882 nt		3.97	□□□□□ -1.77
VMA11	P32842	OAZ1	YPL052W	879 nt		3.97	□□□□□ -1.77
VMA11	P32842	YPL199C	YPL199C	723 nt		3.97	□□□□□ -1.77
VMA11	P32842	MRI1	YPR118W	1236 nt		3.97	□□□□□ -1.77
VMA11	P32842	ARB1	YER036C	1833 nt		3.97	□□□□□ -1.77
VMA11	P32842	CTS1	YLR286C	1689 nt		3.97	□□□□□ -1.77
VMA11	P32842	DAK1	YML070W	1755 nt		3.97	□□□□□ -1.77
VMA11	P32842	MBP1	YDL056W	2502 nt		3.96	□□□□□ -1.77
VMA11	P32842	TDA6	YPR157W	1404 nt		3.96	□□□□□ -1.77
VMA11	P32842	RCK1	YGL158W	1539 nt		3.96	□□□□□ -1.78
VMA11	P32842	RML2	YEL050C	1182 nt		3.96	□□□□□ -1.78
VMA11	P32842	THI5	YFL058W	1023 nt		3.96	□□□□□ -1.78
VMA11	P32842	PCT1	YGR202C	1275 nt		3.96	□□□□□ -1.78
VMA11	P32842	YHL049C	YHL049C	816 nt		3.96	□□□□□ -1.78
VMA11	P32842	FMP33	YJL161W	543 nt		3.96	□□□□□ -1.78
VMA11	P32842	YJR012C	YJR012C	624 nt		3.96	□□□□□ -1.78
VMA11	P32842	THI12	YNL332W	1023 nt		3.96	□□□□□ -1.78
VMA11	P32842	SFT2	YBL102W	648 nt		3.96	□□□□□ -1.78
VMA11	P32842	HAL1	YPR005C	885 nt		3.96	□□□□□ -1.78
VMA11	P32842	TPS3	YMR261C	3165 nt		3.96	□□□□□ -1.78
VMA11	P32842	UGA2	YBR006W	1494 nt		3.96	□□□□□ -1.78
VMA11	P32842	DNF2	YDR093W	4839 nt		3.96	□□□□□ -1.78
VMA11	P32842	ADE3	YGR204W	2841 nt		3.96	□□□□□ -1.78
VMA11	P32842	HOT1	YMR172W	2160 nt		3.96	□□□□□ -1.78
VMA11	P32842	PMA1	YGL008C	2757 nt		3.96	□□□□□ -1.78
VMA11	P32842	UGA1	YGR019W	1416 nt		3.95	□□□□□ -1.78
VMA11	P32842	YGR266W	YGR266W	2106 nt		3.95	□□□□□ -1.78
VMA11	P32842	GAL4	YPL248C	2646 nt		3.95	□□□□□ -1.78
VMA11	P32842	SRV2	YNL138W	1581 nt		3.95	□□□□□ -1.78
VMA11	P32842	YDL027C	YDL027C	1263 nt		3.95	□□□□□ -1.78
VMA11	P32842	SUR2	YDR297W	1050 nt		3.95	□□□□□ -1.78
VMA11	P32842	YEL009C-A	YEL009C-A	408 nt		3.95	□□□□□ -1.78
VMA11	P32842	ETT1	YOR051C	1239 nt		3.95	□□□□□ -1.78
VMA11	P32842	GUS1	YGL245W	2127 nt		3.94	□□□□□ -1.78
VMA11	P32842	HRR25	YPL204W	1485 nt		3.94	□□□□□ -1.78
VMA11	P32842	YTA12	YMR089C	2478 nt		3.94	□□□□□ -1.78
VMA11	P32842	YLF2	YHL014C	1218 nt		3.94	□□□□□ -1.78
VMA11	P32842	YNL174W	YNL174W	573 nt		3.94	□□□□□ -1.78
VMA11	P32842	FAA4	YMR246W	2085 nt		3.94	□□□□□ -1.78
VMA11	P32842	TUB3	YML124C	1338 nt		3.94	□□□□□ -1.78
VMA11	P32842	ABF1	YKL112W	2196 nt		3.93	□□□□□ -1.78
VMA11	P32842	TFB3	YDR460W	966 nt		3.93	□□□□□ -1.78
VMA11	P32842	CAB1	YDR531W	1104 nt		3.93	□□□□□ -1.78
VMA11	P32842	HSP31	YDR533C	714 nt		3.93	□□□□□ -1.78
VMA11	P32842	CSR1	YLR380W	1227 nt		3.93	□□□□□ -1.78
VMA11	P32842	DCI1	YOR180C	816 nt		3.93	□□□□□ -1.78
VMA11	P32842	SCP1	YOR367W	603 nt		3.93	□□□□□ -1.78
VMA11	P32842	UBA3	YPR066W	900 nt		3.93	□□□□□ -1.78
VMA11	P32842	FZO1	YBR179C	2568 nt		3.93	□□□□□ -1.78
VMA11	P32842	FRE1	YLR214W	2061 nt		3.93	□□□□□ -1.78
VMA11	P32842	CUE2	YKL090W	1332 nt		3.93	□□□□□ -1.78
VMA11	P32842	SLT2	YHR030C	1455 nt		3.92	□□□□□ -1.78
VMA11	P32842	MMT2	YPL224C	1455 nt		3.92	□□□□□ -1.78
VMA11	P32842	ESF1	YDR365C	1887 nt		3.92	□□□□□ -1.78
VMA11	P32842	THI20	YOL055C	1656 nt		3.92	□□□□□ -1.78
VMA11	P32842	MDG1	YNL173C	1101 nt		3.92	□□□□□ -1.78
VMA11	P32842	YPL191C	YPL191C	1083 nt		3.92	□□□□□ -1.78
VMA11	P32842	snR19	snR19	568 nt		3.92	□□□□□ -1.78

Retrieved 100 of 7,029 protein–RNA pairs in 77.4 ms