Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RARRES2P1-201ENST00000474487 481 ntBASIC21.74■■□□□ 1.07
PTPN6P29350 AC019171.1-201ENST00000601251 1056 ntBASIC21.74■■□□□ 1.07
PTPN6P29350 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN6P29350 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN6P29350 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
PTPN6P29350 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN6P29350 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.74■■□□□ 1.07
PTPN6P29350 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN6P29350 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PTPN6P29350 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN6P29350 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN6P29350 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN6P29350 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN6P29350 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN6P29350 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN6P29350 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN6P29350 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN6P29350 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN6P29350 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN6P29350 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN6P29350 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
PTPN6P29350 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN6P29350 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PTPN6P29350 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.73■■□□□ 1.07
PTPN6P29350 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PTPN6P29350 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN6P29350 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PTPN6P29350 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN6P29350 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN6P29350 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN6P29350 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.72■■□□□ 1.07
PTPN6P29350 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN6P29350 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN6P29350 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN6P29350 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN6P29350 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.72■■□□□ 1.07
PTPN6P29350 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN6P29350 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN6P29350 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN6P29350 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN6P29350 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN6P29350 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PTPN6P29350 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN6P29350 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN6P29350 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.71■■□□□ 1.07
PTPN6P29350 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN6P29350 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN6P29350 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN6P29350 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN6P29350 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN6P29350 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.71■■□□□ 1.07
PTPN6P29350 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN6P29350 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN6P29350 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN6P29350 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN6P29350 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN6P29350 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN6P29350 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.7■■□□□ 1.06
PTPN6P29350 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.7■■□□□ 1.06
PTPN6P29350 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN6P29350 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN6P29350 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PTPN6P29350 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN6P29350 AL592295.1-201ENST00000400984 884 ntBASIC21.69■■□□□ 1.06
PTPN6P29350 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.69■■□□□ 1.06
PTPN6P29350 AC103834.1-201ENST00000520383 144 ntBASIC21.69■■□□□ 1.06
PTPN6P29350 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.69■■□□□ 1.06
PTPN6P29350 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.69■■□□□ 1.06
PTPN6P29350 KRT8P33-201ENST00000508125 1423 ntBASIC21.69■■□□□ 1.06
PTPN6P29350 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.69■■□□□ 1.06
PTPN6P29350 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN6P29350 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN6P29350 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PTPN6P29350 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.68■■□□□ 1.06
PTPN6P29350 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN6P29350 MIR4508-201ENST00000584178 70 ntBASIC21.68■■□□□ 1.06
PTPN6P29350 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PTPN6P29350 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.68■■□□□ 1.06
PTPN6P29350 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN6P29350 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN6P29350 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN6P29350 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPN6P29350 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPN6P29350 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPN6P29350 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPN6P29350 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPN6P29350 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PTPN6P29350 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.67■■□□□ 1.06
PTPN6P29350 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPN6P29350 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPN6P29350 ANOS2P-203ENST00000472227 1816 ntBASIC21.66■■□□□ 1.06
PTPN6P29350 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN6P29350 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
PTPN6P29350 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN6P29350 AL161729.1-201ENST00000604104 1402 ntBASIC21.66■■□□□ 1.06
PTPN6P29350 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN6P29350 YBX1P4-201ENST00000392794 808 ntBASIC21.66■■□□□ 1.06
PTPN6P29350 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PTPN6P29350 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PTPN6P29350 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms