Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.26■□□□□ 0.67
LMO1P25800 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO1P25800 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO1P25800 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LMO1P25800 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO1P25800 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO1P25800 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMO1P25800 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO1P25800 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMO1P25800 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO1P25800 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO1P25800 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMO1P25800 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.25■□□□□ 0.67
LMO1P25800 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.24■□□□□ 0.67
LMO1P25800 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.24■□□□□ 0.67
LMO1P25800 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.24■□□□□ 0.67
LMO1P25800 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.24■□□□□ 0.67
LMO1P25800 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.24■□□□□ 0.67
LMO1P25800 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.24■□□□□ 0.67
LMO1P25800 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LMO1P25800 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LMO1P25800 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.24■□□□□ 0.67
LMO1P25800 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMO1P25800 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMO1P25800 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO1P25800 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO1P25800 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO1P25800 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.23■□□□□ 0.67
LMO1P25800 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO1P25800 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO1P25800 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.23■□□□□ 0.67
LMO1P25800 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.23■□□□□ 0.67
LMO1P25800 THA1P-201ENST00000590384 1145 ntBASIC19.23■□□□□ 0.67
LMO1P25800 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO1P25800 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO1P25800 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO1P25800 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO1P25800 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMO1P25800 AC131274.2-201ENST00000580697 1507 ntBASIC19.22■□□□□ 0.67
LMO1P25800 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO1P25800 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.22■□□□□ 0.67
LMO1P25800 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.22■□□□□ 0.67
LMO1P25800 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.22■□□□□ 0.67
LMO1P25800 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.22■□□□□ 0.67
LMO1P25800 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LMO1P25800 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO1P25800 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO1P25800 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.21■□□□□ 0.67
LMO1P25800 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMO1P25800 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO1P25800 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO1P25800 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
LMO1P25800 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMO1P25800 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMO1P25800 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMO1P25800 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.21■□□□□ 0.67
LMO1P25800 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.21■□□□□ 0.67
LMO1P25800 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LMO1P25800 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMO1P25800 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO1P25800 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO1P25800 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO1P25800 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO1P25800 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO1P25800 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LMO1P25800 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.2■□□□□ 0.66
LMO1P25800 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.2■□□□□ 0.66
LMO1P25800 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.2■□□□□ 0.66
LMO1P25800 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO1P25800 AC103834.1-201ENST00000520383 144 ntBASIC19.2■□□□□ 0.66
LMO1P25800 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.2■□□□□ 0.66
LMO1P25800 MIR4281-201ENST00000580852 62 ntBASIC19.2■□□□□ 0.66
LMO1P25800 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO1P25800 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LMO1P25800 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
LMO1P25800 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO1P25800 AF131216.4-201ENST00000638924 1588 ntBASIC19.19■□□□□ 0.66
LMO1P25800 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMO1P25800 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LMO1P25800 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
LMO1P25800 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO1P25800 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO1P25800 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMO1P25800 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO1P25800 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LMO1P25800 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.19■□□□□ 0.66
LMO1P25800 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO1P25800 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
LMO1P25800 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO1P25800 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.19■□□□□ 0.66
LMO1P25800 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO1P25800 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMO1P25800 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.18■□□□□ 0.66
LMO1P25800 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO1P25800 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMO1P25800 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
LMO1P25800 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMO1P25800 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMO1P25800 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO1P25800 DUSP8P5-201ENST00000422884 1815 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms