Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
KCNA3P22001 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
KCNA3P22001 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
KCNA3P22001 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC28.56■■■□□ 2.16
KCNA3P22001 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC28.56■■■□□ 2.16
KCNA3P22001 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
KCNA3P22001 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC28.55■■■□□ 2.16
KCNA3P22001 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
KCNA3P22001 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
KCNA3P22001 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC28.55■■■□□ 2.16
KCNA3P22001 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC28.55■■■□□ 2.16
KCNA3P22001 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
KCNA3P22001 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
KCNA3P22001 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
KCNA3P22001 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.54■■■□□ 2.16
KCNA3P22001 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
KCNA3P22001 AC123595.1-201ENST00000440769 1046 ntBASIC28.54■■■□□ 2.16
KCNA3P22001 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.54■■■□□ 2.16
KCNA3P22001 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC28.54■■■□□ 2.16
KCNA3P22001 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.54■■■□□ 2.16
KCNA3P22001 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC28.54■■■□□ 2.16
KCNA3P22001 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
KCNA3P22001 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
KCNA3P22001 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
KCNA3P22001 AC027612.3-201ENST00000413684 1047 ntBASIC28.53■■■□□ 2.16
KCNA3P22001 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC28.53■■■□□ 2.16
KCNA3P22001 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.53■■■□□ 2.16
KCNA3P22001 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
KCNA3P22001 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.53■■■□□ 2.16
KCNA3P22001 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
KCNA3P22001 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC28.52■■■□□ 2.16
KCNA3P22001 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
KCNA3P22001 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
KCNA3P22001 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
KCNA3P22001 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC28.52■■■□□ 2.16
KCNA3P22001 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC28.52■■■□□ 2.16
KCNA3P22001 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
KCNA3P22001 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC28.51■■■□□ 2.15
KCNA3P22001 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
KCNA3P22001 NME4-202ENST00000382940 766 ntTSL 3 BASIC28.51■■■□□ 2.15
KCNA3P22001 HLA-L-209ENST00000420110 1011 ntBASIC28.51■■■□□ 2.15
KCNA3P22001 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.51■■■□□ 2.15
KCNA3P22001 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.51■■■□□ 2.15
KCNA3P22001 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.51■■■□□ 2.15
KCNA3P22001 NME4-211ENST00000620944 1193 ntTSL 2 BASIC28.51■■■□□ 2.15
KCNA3P22001 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
KCNA3P22001 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.51■■■□□ 2.15
KCNA3P22001 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
KCNA3P22001 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
KCNA3P22001 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
KCNA3P22001 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC28.5■■■□□ 2.15
KCNA3P22001 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
KCNA3P22001 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
KCNA3P22001 TSPY26P-201ENST00000476365 1326 ntBASIC28.49■■■□□ 2.15
KCNA3P22001 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
KCNA3P22001 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
KCNA3P22001 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
KCNA3P22001 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
KCNA3P22001 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
KCNA3P22001 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
KCNA3P22001 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
KCNA3P22001 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.49■■■□□ 2.15
KCNA3P22001 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.49■■■□□ 2.15
KCNA3P22001 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.49■■■□□ 2.15
KCNA3P22001 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
KCNA3P22001 AC126544.1-201ENST00000580842 1059 ntBASIC28.48■■■□□ 2.15
KCNA3P22001 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
KCNA3P22001 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
KCNA3P22001 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
KCNA3P22001 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC28.47■■■□□ 2.15
KCNA3P22001 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC28.47■■■□□ 2.15
KCNA3P22001 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
KCNA3P22001 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
KCNA3P22001 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
KCNA3P22001 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
KCNA3P22001 ME3-201ENST00000323418 1068 ntTSL 5 BASIC28.46■■■□□ 2.15
KCNA3P22001 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
KCNA3P22001 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
KCNA3P22001 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.46■■■□□ 2.15
KCNA3P22001 CCDC92B-201ENST00000575506 885 ntBASIC28.46■■■□□ 2.15
KCNA3P22001 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC28.46■■■□□ 2.15
KCNA3P22001 AL358852.1-201ENST00000623174 1268 ntBASIC28.46■■■□□ 2.15
KCNA3P22001 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
KCNA3P22001 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
KCNA3P22001 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
KCNA3P22001 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
KCNA3P22001 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
KCNA3P22001 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.15
KCNA3P22001 AC009086.3-201ENST00000623486 1008 ntBASIC28.45■■■□□ 2.14
KCNA3P22001 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.45■■■□□ 2.14
KCNA3P22001 ERN1-208ENST00000606895 2068 ntBASIC28.44■■■□□ 2.14
KCNA3P22001 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.44■■■□□ 2.14
KCNA3P22001 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
KCNA3P22001 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC28.44■■■□□ 2.14
KCNA3P22001 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC28.44■■■□□ 2.14
KCNA3P22001 NTF6G-201ENST00000591094 616 ntBASIC28.44■■■□□ 2.14
KCNA3P22001 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC28.44■■■□□ 2.14
KCNA3P22001 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
KCNA3P22001 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
KCNA3P22001 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms