Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DEFA4P12838 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
DEFA4P12838 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.46■□□□□ 0.55
DEFA4P12838 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.46■□□□□ 0.55
DEFA4P12838 SPCS2P3-201ENST00000500401 656 ntBASIC18.46■□□□□ 0.55
DEFA4P12838 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.46■□□□□ 0.55
DEFA4P12838 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.46■□□□□ 0.55
DEFA4P12838 MIR6089-201ENST00000616698 64 ntBASIC18.46■□□□□ 0.55
DEFA4P12838 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DEFA4P12838 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
DEFA4P12838 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.46■□□□□ 0.55
DEFA4P12838 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DEFA4P12838 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DEFA4P12838 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
DEFA4P12838 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
DEFA4P12838 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
DEFA4P12838 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
DEFA4P12838 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.45■□□□□ 0.54
DEFA4P12838 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DEFA4P12838 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DEFA4P12838 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.45■□□□□ 0.54
DEFA4P12838 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.45■□□□□ 0.54
DEFA4P12838 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DEFA4P12838 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DEFA4P12838 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
DEFA4P12838 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DEFA4P12838 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DEFA4P12838 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DEFA4P12838 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
DEFA4P12838 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DEFA4P12838 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
DEFA4P12838 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DEFA4P12838 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
DEFA4P12838 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DEFA4P12838 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
DEFA4P12838 PKD1P6-201ENST00000343738 4769 ntBASIC18.43■□□□□ 0.54
DEFA4P12838 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
DEFA4P12838 AC141586.4-201ENST00000624558 1573 ntBASIC18.43■□□□□ 0.54
DEFA4P12838 AC087393.1-201ENST00000582896 145 ntBASIC18.43■□□□□ 0.54
DEFA4P12838 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DEFA4P12838 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DEFA4P12838 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
DEFA4P12838 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DEFA4P12838 CLDN5-201ENST00000403084 2357 ntBASIC18.42■□□□□ 0.54
DEFA4P12838 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
DEFA4P12838 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DEFA4P12838 AC129492.7-201ENST00000622992 756 ntBASIC18.42■□□□□ 0.54
DEFA4P12838 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DEFA4P12838 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DEFA4P12838 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DEFA4P12838 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DEFA4P12838 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DEFA4P12838 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DEFA4P12838 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DEFA4P12838 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DEFA4P12838 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DEFA4P12838 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DEFA4P12838 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.41■□□□□ 0.54
DEFA4P12838 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DEFA4P12838 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DEFA4P12838 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DEFA4P12838 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.41■□□□□ 0.54
DEFA4P12838 KRT18P60-201ENST00000312876 1297 ntBASIC18.41■□□□□ 0.54
DEFA4P12838 NTF6A-201ENST00000591175 560 ntBASIC18.41■□□□□ 0.54
DEFA4P12838 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DEFA4P12838 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DEFA4P12838 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DEFA4P12838 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.41■□□□□ 0.54
DEFA4P12838 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.4■□□□□ 0.54
DEFA4P12838 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.4■□□□□ 0.54
DEFA4P12838 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEFA4P12838 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEFA4P12838 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.4■□□□□ 0.54
DEFA4P12838 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.4■□□□□ 0.54
DEFA4P12838 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEFA4P12838 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEFA4P12838 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEFA4P12838 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
DEFA4P12838 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.4■□□□□ 0.54
DEFA4P12838 AC139795.1-202ENST00000500444 432 ntBASIC18.4■□□□□ 0.54
DEFA4P12838 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.4■□□□□ 0.54
DEFA4P12838 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEFA4P12838 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEFA4P12838 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.4■□□□□ 0.54
DEFA4P12838 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
DEFA4P12838 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEFA4P12838 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.39■□□□□ 0.54
DEFA4P12838 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DEFA4P12838 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEFA4P12838 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEFA4P12838 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
DEFA4P12838 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEFA4P12838 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEFA4P12838 AL592295.1-201ENST00000400984 884 ntBASIC18.39■□□□□ 0.53
DEFA4P12838 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.39■□□□□ 0.53
DEFA4P12838 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DEFA4P12838 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.39■□□□□ 0.53
DEFA4P12838 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DEFA4P12838 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DEFA4P12838 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms