Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB40ALP0C0E4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 AL136162.1-201ENST00000607711 1078 ntBASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAB40ALP0C0E4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAB40ALP0C0E4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.58■■□□□ 1.05
RAB40ALP0C0E4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.58■■□□□ 1.05
RAB40ALP0C0E4 DUX4L19-201ENST00000557448 1267 ntBASIC21.58■■□□□ 1.05
RAB40ALP0C0E4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.58■■□□□ 1.04
RAB40ALP0C0E4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.58■■□□□ 1.04
RAB40ALP0C0E4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RAB40ALP0C0E4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.57■■□□□ 1.04
RAB40ALP0C0E4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAB40ALP0C0E4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.57■■□□□ 1.04
RAB40ALP0C0E4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAB40ALP0C0E4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.57■■□□□ 1.04
RAB40ALP0C0E4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB40ALP0C0E4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAB40ALP0C0E4 AC135279.3-201ENST00000610945 1311 ntBASIC21.56■■□□□ 1.04
RAB40ALP0C0E4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB40ALP0C0E4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAB40ALP0C0E4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.56■■□□□ 1.04
RAB40ALP0C0E4 AC092171.4-201ENST00000609130 632 ntBASIC21.56■■□□□ 1.04
RAB40ALP0C0E4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB40ALP0C0E4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
RAB40ALP0C0E4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB40ALP0C0E4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.56■■□□□ 1.04
RAB40ALP0C0E4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40ALP0C0E4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40ALP0C0E4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40ALP0C0E4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40ALP0C0E4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40ALP0C0E4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40ALP0C0E4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40ALP0C0E4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40ALP0C0E4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RAB40ALP0C0E4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RAB40ALP0C0E4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RAB40ALP0C0E4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RAB40ALP0C0E4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB40ALP0C0E4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.54■■□□□ 1.04
RAB40ALP0C0E4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.54■■□□□ 1.04
RAB40ALP0C0E4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.54■■□□□ 1.04
RAB40ALP0C0E4 AC142381.2-201ENST00000566120 298 ntBASIC21.54■■□□□ 1.04
RAB40ALP0C0E4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.54■■□□□ 1.04
RAB40ALP0C0E4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB40ALP0C0E4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAB40ALP0C0E4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB40ALP0C0E4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.53■■□□□ 1.04
RAB40ALP0C0E4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB40ALP0C0E4 EDA-201ENST00000338901 1233 ntBASIC21.53■■□□□ 1.04
RAB40ALP0C0E4 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.53■■□□□ 1.04
RAB40ALP0C0E4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB40ALP0C0E4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB40ALP0C0E4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RAB40ALP0C0E4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB40ALP0C0E4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB40ALP0C0E4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB40ALP0C0E4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB40ALP0C0E4 AC093323.1-202ENST00000635031 2045 ntBASIC21.52■■□□□ 1.04
RAB40ALP0C0E4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
RAB40ALP0C0E4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.52■■□□□ 1.04
RAB40ALP0C0E4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.52■■□□□ 1.04
RAB40ALP0C0E4 AC024257.2-201ENST00000549699 147 ntBASIC21.52■■□□□ 1.04
RAB40ALP0C0E4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.52■■□□□ 1.04
RAB40ALP0C0E4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.52■■□□□ 1.04
RAB40ALP0C0E4 AL161729.1-201ENST00000604104 1402 ntBASIC21.52■■□□□ 1.04
RAB40ALP0C0E4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RAB40ALP0C0E4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RAB40ALP0C0E4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 SUDS3P1-201ENST00000505831 966 ntBASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 AL031432.3-201ENST00000607698 485 ntBASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 AL355001.2-201ENST00000620617 1191 ntBASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB40ALP0C0E4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms