Protein–RNA interactions for Protein: P08047

SP1, Transcription factor Sp1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP1P08047 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.88■□□□□ 0.93
SP1P08047 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SP1P08047 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SP1P08047 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SP1P08047 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SP1P08047 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SP1P08047 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.87■□□□□ 0.93
SP1P08047 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.87■□□□□ 0.93
SP1P08047 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SP1P08047 DUX4L19-201ENST00000557448 1267 ntBASIC20.87■□□□□ 0.93
SP1P08047 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SP1P08047 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SP1P08047 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SP1P08047 AC135279.3-201ENST00000610945 1311 ntBASIC20.86■□□□□ 0.93
SP1P08047 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SP1P08047 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.86■□□□□ 0.93
SP1P08047 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SP1P08047 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.86■□□□□ 0.93
SP1P08047 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SP1P08047 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SP1P08047 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.85■□□□□ 0.93
SP1P08047 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.85■□□□□ 0.93
SP1P08047 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SP1P08047 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SP1P08047 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SP1P08047 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.85■□□□□ 0.93
SP1P08047 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SP1P08047 AC092171.4-201ENST00000609130 632 ntBASIC20.85■□□□□ 0.93
SP1P08047 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.85■□□□□ 0.93
SP1P08047 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SP1P08047 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
SP1P08047 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SP1P08047 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.85■□□□□ 0.93
SP1P08047 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SP1P08047 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SP1P08047 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SP1P08047 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SP1P08047 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
SP1P08047 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SP1P08047 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SP1P08047 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.84■□□□□ 0.93
SP1P08047 AC024257.2-201ENST00000549699 147 ntBASIC20.84■□□□□ 0.93
SP1P08047 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.84■□□□□ 0.93
SP1P08047 AC022211.4-201ENST00000625094 2161 ntBASIC20.84■□□□□ 0.93
SP1P08047 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SP1P08047 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SP1P08047 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SP1P08047 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SP1P08047 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.84■□□□□ 0.93
SP1P08047 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.84■□□□□ 0.93
SP1P08047 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SP1P08047 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.83■□□□□ 0.93
SP1P08047 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SP1P08047 AC009102.2-201ENST00000606772 1639 ntBASIC20.83■□□□□ 0.93
SP1P08047 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
SP1P08047 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SP1P08047 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.83■□□□□ 0.93
SP1P08047 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.83■□□□□ 0.92
SP1P08047 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SP1P08047 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SP1P08047 AC142381.2-201ENST00000566120 298 ntBASIC20.82■□□□□ 0.92
SP1P08047 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SP1P08047 AP003733.4-201ENST00000623785 1697 ntBASIC20.82■□□□□ 0.92
SP1P08047 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SP1P08047 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SP1P08047 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SP1P08047 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SP1P08047 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SP1P08047 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.81■□□□□ 0.92
SP1P08047 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SP1P08047 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
SP1P08047 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.81■□□□□ 0.92
SP1P08047 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.81■□□□□ 0.92
SP1P08047 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SP1P08047 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SP1P08047 SYT6-210ENST00000641643 1587 ntBASIC20.8■□□□□ 0.92
SP1P08047 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SP1P08047 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SP1P08047 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SP1P08047 EDA-201ENST00000338901 1233 ntBASIC20.8■□□□□ 0.92
SP1P08047 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SP1P08047 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SP1P08047 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SP1P08047 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SP1P08047 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SP1P08047 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.79■□□□□ 0.92
SP1P08047 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SP1P08047 SUDS3P1-201ENST00000505831 966 ntBASIC20.79■□□□□ 0.92
SP1P08047 AC099791.2-201ENST00000605725 427 ntBASIC20.79■□□□□ 0.92
SP1P08047 AL031432.3-201ENST00000607698 485 ntBASIC20.79■□□□□ 0.92
SP1P08047 AL355001.2-201ENST00000620617 1191 ntBASIC20.79■□□□□ 0.92
SP1P08047 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SP1P08047 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SP1P08047 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SP1P08047 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SP1P08047 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SP1P08047 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.78■□□□□ 0.92
SP1P08047 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.78■□□□□ 0.92
SP1P08047 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SP1P08047 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms