Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND4P03905 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND4P03905 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND4P03905 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.82■□□□□ 0.76
MT-ND4P03905 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND4P03905 GPX1-201ENST00000419349 1106 ntBASIC19.82■□□□□ 0.76
MT-ND4P03905 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MT-ND4P03905 MIR6089-201ENST00000616698 64 ntBASIC19.82■□□□□ 0.76
MT-ND4P03905 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MT-ND4P03905 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND4P03905 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND4P03905 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND4P03905 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.81■□□□□ 0.76
MT-ND4P03905 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND4P03905 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
MT-ND4P03905 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.81■□□□□ 0.76
MT-ND4P03905 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND4P03905 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND4P03905 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.81■□□□□ 0.76
MT-ND4P03905 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.81■□□□□ 0.76
MT-ND4P03905 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND4P03905 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND4P03905 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND4P03905 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.81■□□□□ 0.76
MT-ND4P03905 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND4P03905 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND4P03905 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND4P03905 AL024507.2-201ENST00000606070 2574 ntBASIC19.81■□□□□ 0.76
MT-ND4P03905 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.8■□□□□ 0.76
MT-ND4P03905 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.8■□□□□ 0.76
MT-ND4P03905 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND4P03905 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND4P03905 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND4P03905 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
MT-ND4P03905 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.8■□□□□ 0.76
MT-ND4P03905 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.8■□□□□ 0.76
MT-ND4P03905 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.8■□□□□ 0.76
MT-ND4P03905 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.8■□□□□ 0.76
MT-ND4P03905 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND4P03905 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND4P03905 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND4P03905 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND4P03905 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND4P03905 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND4P03905 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND4P03905 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND4P03905 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND4P03905 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-ND4P03905 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND4P03905 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.79■□□□□ 0.76
MT-ND4P03905 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.79■□□□□ 0.76
MT-ND4P03905 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND4P03905 HLA-L-211ENST00000482052 1765 ntBASIC19.78■□□□□ 0.76
MT-ND4P03905 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND4P03905 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND4P03905 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND4P03905 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND4P03905 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
MT-ND4P03905 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND4P03905 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
MT-ND4P03905 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.78■□□□□ 0.76
MT-ND4P03905 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND4P03905 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MT-ND4P03905 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND4P03905 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND4P03905 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.78■□□□□ 0.76
MT-ND4P03905 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND4P03905 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
MT-ND4P03905 C1orf229-201ENST00000623686 2258 ntBASIC19.77■□□□□ 0.76
MT-ND4P03905 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND4P03905 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
MT-ND4P03905 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND4P03905 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.77■□□□□ 0.76
MT-ND4P03905 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND4P03905 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MT-ND4P03905 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
MT-ND4P03905 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND4P03905 LINC00526-201ENST00000581067 1875 ntBASIC19.76■□□□□ 0.75
MT-ND4P03905 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND4P03905 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
MT-ND4P03905 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND4P03905 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
MT-ND4P03905 RAP2CP1-202ENST00000605179 643 ntBASIC19.76■□□□□ 0.75
MT-ND4P03905 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND4P03905 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND4P03905 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND4P03905 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MT-ND4P03905 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND4P03905 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND4P03905 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND4P03905 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.75■□□□□ 0.75
MT-ND4P03905 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.75■□□□□ 0.75
MT-ND4P03905 AC026202.3-201ENST00000600805 1127 ntBASIC19.75■□□□□ 0.75
MT-ND4P03905 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.75■□□□□ 0.75
MT-ND4P03905 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND4P03905 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.75■□□□□ 0.75
MT-ND4P03905 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MT-ND4P03905 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND4P03905 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.75■□□□□ 0.75
MT-ND4P03905 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms