Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-AP01891 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-AP01891 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-AP01891 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.24■□□□□ 0.67
HLA-AP01891 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-AP01891 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-AP01891 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-AP01891 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-AP01891 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-AP01891 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-AP01891 GUSBP5-202ENST00000510805 1989 ntBASIC19.24■□□□□ 0.67
HLA-AP01891 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-AP01891 AC127496.7-201ENST00000625110 1798 ntBASIC19.24■□□□□ 0.67
HLA-AP01891 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-AP01891 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-AP01891 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
HLA-AP01891 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-AP01891 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-AP01891 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-AP01891 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.23■□□□□ 0.67
HLA-AP01891 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-AP01891 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-AP01891 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-AP01891 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-AP01891 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HLA-AP01891 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-AP01891 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-AP01891 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-AP01891 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-AP01891 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-AP01891 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-AP01891 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-AP01891 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-AP01891 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-AP01891 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-AP01891 ANOS2P-203ENST00000472227 1816 ntBASIC19.22■□□□□ 0.67
HLA-AP01891 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HLA-AP01891 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-AP01891 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-AP01891 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-AP01891 AC137767.1-201ENST00000602918 1920 ntBASIC19.21■□□□□ 0.67
HLA-AP01891 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.21■□□□□ 0.67
HLA-AP01891 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HLA-AP01891 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-AP01891 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-AP01891 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-AP01891 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HLA-AP01891 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-AP01891 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-AP01891 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-AP01891 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-AP01891 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-AP01891 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-AP01891 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-AP01891 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HLA-AP01891 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-AP01891 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-AP01891 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
HLA-AP01891 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
HLA-AP01891 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-AP01891 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-AP01891 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HLA-AP01891 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-AP01891 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-AP01891 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-AP01891 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-AP01891 DUSP8P3-201ENST00000399571 1760 ntBASIC19.19■□□□□ 0.66
HLA-AP01891 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-AP01891 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-AP01891 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-AP01891 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-AP01891 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-AP01891 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-AP01891 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-AP01891 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-AP01891 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-AP01891 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-AP01891 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-AP01891 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-AP01891 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-AP01891 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-AP01891 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HLA-AP01891 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
HLA-AP01891 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-AP01891 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.18■□□□□ 0.66
HLA-AP01891 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-AP01891 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-AP01891 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-AP01891 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-AP01891 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-AP01891 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HLA-AP01891 AL024507.2-201ENST00000606070 2574 ntBASIC19.17■□□□□ 0.66
HLA-AP01891 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-AP01891 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-AP01891 AC126177.7-201ENST00000547904 679 ntBASIC19.17■□□□□ 0.66
HLA-AP01891 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
HLA-AP01891 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-AP01891 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-AP01891 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-AP01891 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms