Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM3O75382 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TRIM3O75382 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM3O75382 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
TRIM3O75382 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM3O75382 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRIM3O75382 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRIM3O75382 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM3O75382 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRIM3O75382 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM3O75382 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM3O75382 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM3O75382 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
TRIM3O75382 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM3O75382 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM3O75382 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM3O75382 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM3O75382 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM3O75382 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM3O75382 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM3O75382 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM3O75382 CLDN5-201ENST00000403084 2357 ntBASIC21.18■□□□□ 0.98
TRIM3O75382 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM3O75382 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TRIM3O75382 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM3O75382 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM3O75382 AC068473.5-201ENST00000616428 2072 ntBASIC21.18■□□□□ 0.98
TRIM3O75382 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM3O75382 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM3O75382 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM3O75382 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TRIM3O75382 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM3O75382 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM3O75382 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM3O75382 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM3O75382 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM3O75382 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM3O75382 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM3O75382 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM3O75382 TSPY9P-201ENST00000440215 945 ntBASIC21.17■□□□□ 0.98
TRIM3O75382 TSPY11P-201ENST00000442607 1045 ntBASIC21.17■□□□□ 0.98
TRIM3O75382 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM3O75382 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM3O75382 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM3O75382 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM3O75382 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIM3O75382 AL139125.2-201ENST00000623134 1869 ntBASIC21.17■□□□□ 0.98
TRIM3O75382 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM3O75382 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TRIM3O75382 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TRIM3O75382 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM3O75382 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM3O75382 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM3O75382 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM3O75382 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM3O75382 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM3O75382 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM3O75382 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM3O75382 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM3O75382 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM3O75382 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
TRIM3O75382 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRIM3O75382 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM3O75382 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.15■□□□□ 0.98
TRIM3O75382 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.15■□□□□ 0.98
TRIM3O75382 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM3O75382 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM3O75382 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM3O75382 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM3O75382 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TRIM3O75382 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM3O75382 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM3O75382 KRT16P3-201ENST00000439127 1283 ntBASIC21.14■□□□□ 0.97
TRIM3O75382 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TRIM3O75382 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.14■□□□□ 0.97
TRIM3O75382 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.14■□□□□ 0.97
TRIM3O75382 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
TRIM3O75382 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM3O75382 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM3O75382 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM3O75382 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM3O75382 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRIM3O75382 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM3O75382 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM3O75382 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM3O75382 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRIM3O75382 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM3O75382 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM3O75382 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM3O75382 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM3O75382 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM3O75382 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM3O75382 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM3O75382 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.12■□□□□ 0.97
TRIM3O75382 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM3O75382 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRIM3O75382 SNX5-217ENST00000606557 1087 ntBASIC21.12■□□□□ 0.97
TRIM3O75382 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.12■□□□□ 0.97
TRIM3O75382 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.12■□□□□ 0.97
TRIM3O75382 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms