Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.94■■□□□ 1.1
LCMT2O60294 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCMT2O60294 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.94■■□□□ 1.1
LCMT2O60294 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
LCMT2O60294 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
LCMT2O60294 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LCMT2O60294 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.93■■□□□ 1.1
LCMT2O60294 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LCMT2O60294 TSPY9P-201ENST00000440215 945 ntBASIC21.93■■□□□ 1.1
LCMT2O60294 TSPY11P-201ENST00000442607 1045 ntBASIC21.93■■□□□ 1.1
LCMT2O60294 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.93■■□□□ 1.1
LCMT2O60294 UNC93B8-201ENST00000511903 705 ntBASIC21.93■■□□□ 1.1
LCMT2O60294 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.93■■□□□ 1.1
LCMT2O60294 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.93■■□□□ 1.1
LCMT2O60294 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.93■■□□□ 1.1
LCMT2O60294 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.93■■□□□ 1.1
LCMT2O60294 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LCMT2O60294 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCMT2O60294 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCMT2O60294 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.92■■□□□ 1.1
LCMT2O60294 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.92■■□□□ 1.1
LCMT2O60294 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LCMT2O60294 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCMT2O60294 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.92■■□□□ 1.1
LCMT2O60294 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCMT2O60294 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCMT2O60294 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LCMT2O60294 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCMT2O60294 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
LCMT2O60294 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
LCMT2O60294 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
LCMT2O60294 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
LCMT2O60294 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCMT2O60294 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCMT2O60294 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCMT2O60294 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCMT2O60294 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.91■■□□□ 1.1
LCMT2O60294 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LCMT2O60294 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LCMT2O60294 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LCMT2O60294 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LCMT2O60294 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
LCMT2O60294 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
LCMT2O60294 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LCMT2O60294 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LCMT2O60294 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.9■■□□□ 1.1
LCMT2O60294 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LCMT2O60294 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LCMT2O60294 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
LCMT2O60294 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LCMT2O60294 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.9■■□□□ 1.1
LCMT2O60294 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LCMT2O60294 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LCMT2O60294 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
LCMT2O60294 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LCMT2O60294 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.89■■□□□ 1.09
LCMT2O60294 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.89■■□□□ 1.09
LCMT2O60294 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LCMT2O60294 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.89■■□□□ 1.09
LCMT2O60294 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.89■■□□□ 1.09
LCMT2O60294 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.89■■□□□ 1.09
LCMT2O60294 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LCMT2O60294 ALDH1A3-203ENST00000557963 1670 ntBASIC21.88■■□□□ 1.09
LCMT2O60294 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.88■■□□□ 1.09
LCMT2O60294 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LCMT2O60294 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.88■■□□□ 1.09
LCMT2O60294 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LCMT2O60294 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LCMT2O60294 MIR6722-201ENST00000617286 78 ntBASIC21.88■■□□□ 1.09
LCMT2O60294 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LCMT2O60294 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.88■■□□□ 1.09
LCMT2O60294 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LCMT2O60294 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LCMT2O60294 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.87■■□□□ 1.09
LCMT2O60294 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCMT2O60294 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCMT2O60294 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCMT2O60294 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.87■■□□□ 1.09
LCMT2O60294 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.87■■□□□ 1.09
LCMT2O60294 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.87■■□□□ 1.09
LCMT2O60294 AC010997.5-201ENST00000609182 354 ntBASIC21.87■■□□□ 1.09
LCMT2O60294 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.87■■□□□ 1.09
LCMT2O60294 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LCMT2O60294 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.87■■□□□ 1.09
LCMT2O60294 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LCMT2O60294 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LCMT2O60294 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCMT2O60294 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCMT2O60294 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.86■■□□□ 1.09
LCMT2O60294 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCMT2O60294 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCMT2O60294 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCMT2O60294 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCMT2O60294 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LCMT2O60294 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
LCMT2O60294 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.85■■□□□ 1.09
LCMT2O60294 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LCMT2O60294 MTDHP2-201ENST00000601468 714 ntBASIC21.85■■□□□ 1.09
LCMT2O60294 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LCMT2O60294 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms