Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX5O60225 ECEL1P2-201ENST00000461596 1295 ntBASIC19.5■□□□□ 0.71
SSX5O60225 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.5■□□□□ 0.71
SSX5O60225 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.49■□□□□ 0.71
SSX5O60225 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX5O60225 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX5O60225 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX5O60225 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SSX5O60225 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.49■□□□□ 0.71
SSX5O60225 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
SSX5O60225 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SSX5O60225 AL024507.2-201ENST00000606070 2574 ntBASIC19.48■□□□□ 0.71
SSX5O60225 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SSX5O60225 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
SSX5O60225 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.48■□□□□ 0.71
SSX5O60225 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 ANOS2P-203ENST00000472227 1816 ntBASIC19.48■□□□□ 0.71
SSX5O60225 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX5O60225 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SSX5O60225 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSX5O60225 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSX5O60225 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX5O60225 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX5O60225 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX5O60225 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.47■□□□□ 0.71
SSX5O60225 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX5O60225 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX5O60225 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX5O60225 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.47■□□□□ 0.71
SSX5O60225 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX5O60225 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX5O60225 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SSX5O60225 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.47■□□□□ 0.71
SSX5O60225 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SSX5O60225 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SSX5O60225 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX5O60225 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.46■□□□□ 0.71
SSX5O60225 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX5O60225 AC233723.2-201ENST00000623798 2106 ntBASIC19.46■□□□□ 0.71
SSX5O60225 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX5O60225 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX5O60225 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SSX5O60225 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.45■□□□□ 0.7
SSX5O60225 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX5O60225 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
SSX5O60225 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.45■□□□□ 0.7
SSX5O60225 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX5O60225 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX5O60225 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSX5O60225 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SSX5O60225 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX5O60225 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.45■□□□□ 0.7
SSX5O60225 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.45■□□□□ 0.7
SSX5O60225 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX5O60225 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.45■□□□□ 0.7
SSX5O60225 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSX5O60225 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX5O60225 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX5O60225 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX5O60225 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX5O60225 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.44■□□□□ 0.7
SSX5O60225 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SSX5O60225 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX5O60225 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX5O60225 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SSX5O60225 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX5O60225 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.44■□□□□ 0.7
SSX5O60225 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSX5O60225 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.44■□□□□ 0.7
SSX5O60225 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.44■□□□□ 0.7
SSX5O60225 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSX5O60225 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX5O60225 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX5O60225 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SSX5O60225 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.43■□□□□ 0.7
SSX5O60225 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX5O60225 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX5O60225 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX5O60225 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX5O60225 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX5O60225 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
SSX5O60225 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.43■□□□□ 0.7
SSX5O60225 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX5O60225 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.43■□□□□ 0.7
SSX5O60225 EP400NL-214ENST00000641289 2402 ntBASIC19.43■□□□□ 0.7
SSX5O60225 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX5O60225 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX5O60225 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms