Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC27.45■■□□□ 1.98
FOXN1O15353 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
FOXN1O15353 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.44■■□□□ 1.98
FOXN1O15353 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
FOXN1O15353 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC27.44■■□□□ 1.98
FOXN1O15353 DUX4L2-201ENST00000561772 1275 ntBASIC27.44■■□□□ 1.98
FOXN1O15353 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.44■■□□□ 1.98
FOXN1O15353 DUX4L6-201ENST00000626483 1275 ntBASIC27.44■■□□□ 1.98
FOXN1O15353 DUX4L1-201ENST00000627662 1275 ntBASIC27.44■■□□□ 1.98
FOXN1O15353 DUX4L8-201ENST00000629013 1275 ntBASIC27.44■■□□□ 1.98
FOXN1O15353 DUX4L3-201ENST00000630187 1275 ntBASIC27.44■■□□□ 1.98
FOXN1O15353 DUX4L7-201ENST00000630678 1275 ntBASIC27.44■■□□□ 1.98
FOXN1O15353 DUX4L5-201ENST00000630834 1275 ntBASIC27.44■■□□□ 1.98
FOXN1O15353 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
FOXN1O15353 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
FOXN1O15353 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
FOXN1O15353 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
FOXN1O15353 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
FOXN1O15353 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.43■■□□□ 1.98
FOXN1O15353 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC27.43■■□□□ 1.98
FOXN1O15353 AC099791.1-201ENST00000416440 715 ntBASIC27.43■■□□□ 1.98
FOXN1O15353 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
FOXN1O15353 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC27.43■■□□□ 1.98
FOXN1O15353 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.43■■□□□ 1.98
FOXN1O15353 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
FOXN1O15353 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.43■■□□□ 1.98
FOXN1O15353 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.43■■□□□ 1.98
FOXN1O15353 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
FOXN1O15353 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.42■■□□□ 1.98
FOXN1O15353 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
FOXN1O15353 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC27.42■■□□□ 1.98
FOXN1O15353 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
FOXN1O15353 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
FOXN1O15353 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.41■■□□□ 1.98
FOXN1O15353 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC27.41■■□□□ 1.98
FOXN1O15353 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
FOXN1O15353 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC27.41■■□□□ 1.98
FOXN1O15353 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC27.41■■□□□ 1.98
FOXN1O15353 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC27.41■■□□□ 1.98
FOXN1O15353 SNX5-217ENST00000606557 1087 ntBASIC27.41■■□□□ 1.98
FOXN1O15353 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
FOXN1O15353 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.4■■□□□ 1.98
FOXN1O15353 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
FOXN1O15353 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
FOXN1O15353 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
FOXN1O15353 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
FOXN1O15353 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC27.39■■□□□ 1.98
FOXN1O15353 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
FOXN1O15353 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
FOXN1O15353 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
FOXN1O15353 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
FOXN1O15353 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.38■■□□□ 1.97
FOXN1O15353 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
FOXN1O15353 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC27.38■■□□□ 1.97
FOXN1O15353 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
FOXN1O15353 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
FOXN1O15353 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
FOXN1O15353 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
FOXN1O15353 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
FOXN1O15353 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
FOXN1O15353 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.37■■□□□ 1.97
FOXN1O15353 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.37■■□□□ 1.97
FOXN1O15353 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
FOXN1O15353 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
FOXN1O15353 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
FOXN1O15353 YBX1P1-201ENST00000445822 960 ntBASIC27.36■■□□□ 1.97
FOXN1O15353 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC27.36■■□□□ 1.97
FOXN1O15353 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
FOXN1O15353 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
FOXN1O15353 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
FOXN1O15353 SERBP1P1-201ENST00000396021 1160 ntBASIC27.35■■□□□ 1.97
FOXN1O15353 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.35■■□□□ 1.97
FOXN1O15353 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.35■■□□□ 1.97
FOXN1O15353 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.35■■□□□ 1.97
FOXN1O15353 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
FOXN1O15353 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
FOXN1O15353 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
FOXN1O15353 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
FOXN1O15353 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
FOXN1O15353 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27.34■■□□□ 1.97
FOXN1O15353 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27.34■■□□□ 1.97
FOXN1O15353 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
FOXN1O15353 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
FOXN1O15353 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
FOXN1O15353 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.34■■□□□ 1.97
FOXN1O15353 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
FOXN1O15353 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.33■■□□□ 1.97
FOXN1O15353 AC010501.1-201ENST00000606270 1962 ntBASIC27.33■■□□□ 1.97
FOXN1O15353 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
FOXN1O15353 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
FOXN1O15353 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
FOXN1O15353 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.32■■□□□ 1.96
FOXN1O15353 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
FOXN1O15353 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
FOXN1O15353 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC27.31■■□□□ 1.96
FOXN1O15353 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
FOXN1O15353 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC27.31■■□□□ 1.96
FOXN1O15353 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
FOXN1O15353 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
FOXN1O15353 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms