Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.12■□□□□ 0.97
TO15178 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.12■□□□□ 0.97
TO15178 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TO15178 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TO15178 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.12■□□□□ 0.97
TO15178 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.12■□□□□ 0.97
TO15178 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TO15178 AC004812.2-201ENST00000611079 2094 ntBASIC21.12■□□□□ 0.97
TO15178 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TO15178 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TO15178 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TO15178 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.11■□□□□ 0.97
TO15178 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.11■□□□□ 0.97
TO15178 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TO15178 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TO15178 MTDHP2-201ENST00000601468 714 ntBASIC21.11■□□□□ 0.97
TO15178 AC010997.5-201ENST00000609182 354 ntBASIC21.11■□□□□ 0.97
TO15178 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TO15178 ALDH1A3-203ENST00000557963 1670 ntBASIC21.11■□□□□ 0.97
TO15178 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
TO15178 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TO15178 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.1■□□□□ 0.97
TO15178 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TO15178 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TO15178 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.1■□□□□ 0.97
TO15178 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TO15178 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TO15178 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TO15178 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
TO15178 TSPY9P-201ENST00000440215 945 ntBASIC21.1■□□□□ 0.97
TO15178 TSPY11P-201ENST00000442607 1045 ntBASIC21.1■□□□□ 0.97
TO15178 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.1■□□□□ 0.97
TO15178 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TO15178 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.1■□□□□ 0.97
TO15178 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TO15178 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TO15178 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TO15178 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TO15178 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TO15178 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TO15178 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.09■□□□□ 0.97
TO15178 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.09■□□□□ 0.97
TO15178 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TO15178 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.09■□□□□ 0.97
TO15178 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.09■□□□□ 0.97
TO15178 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.09■□□□□ 0.97
TO15178 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TO15178 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.09■□□□□ 0.97
TO15178 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.09■□□□□ 0.97
TO15178 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TO15178 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TO15178 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TO15178 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TO15178 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TO15178 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TO15178 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TO15178 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.08■□□□□ 0.97
TO15178 AC093323.1-202ENST00000635031 2045 ntBASIC21.08■□□□□ 0.97
TO15178 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TO15178 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TO15178 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TO15178 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.07■□□□□ 0.96
TO15178 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TO15178 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.07■□□□□ 0.96
TO15178 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.07■□□□□ 0.96
TO15178 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TO15178 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TO15178 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.07■□□□□ 0.96
TO15178 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TO15178 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TO15178 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TO15178 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TO15178 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
TO15178 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TO15178 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TO15178 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.06■□□□□ 0.96
TO15178 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.06■□□□□ 0.96
TO15178 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TO15178 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TO15178 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TO15178 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TO15178 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.05■□□□□ 0.96
TO15178 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.05■□□□□ 0.96
TO15178 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.05■□□□□ 0.96
TO15178 KRT16P3-201ENST00000439127 1283 ntBASIC21.05■□□□□ 0.96
TO15178 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TO15178 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TO15178 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TO15178 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TO15178 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TO15178 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TO15178 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TO15178 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TO15178 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TO15178 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.04■□□□□ 0.96
TO15178 MIR6724-1-201ENST00000616420 92 ntBASIC21.04■□□□□ 0.96
TO15178 MIR6724-2-201ENST00000616483 92 ntBASIC21.04■□□□□ 0.96
TO15178 MIR6724-4-201ENST00000617390 92 ntBASIC21.04■□□□□ 0.96
TO15178 MIR6724-3-201ENST00000622482 92 ntBASIC21.04■□□□□ 0.96
TO15178 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms