Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NPC1O15118 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.23■■□□□ 1.31
NPC1O15118 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.23■■□□□ 1.31
NPC1O15118 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.23■■□□□ 1.31
NPC1O15118 AL355001.2-201ENST00000620617 1191 ntBASIC23.23■■□□□ 1.31
NPC1O15118 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NPC1O15118 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NPC1O15118 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPC1O15118 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPC1O15118 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPC1O15118 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPC1O15118 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NPC1O15118 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.22■■□□□ 1.31
NPC1O15118 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.22■■□□□ 1.31
NPC1O15118 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
NPC1O15118 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.21■■□□□ 1.31
NPC1O15118 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NPC1O15118 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
NPC1O15118 SUDS3P1-201ENST00000505831 966 ntBASIC23.21■■□□□ 1.31
NPC1O15118 AC024257.2-201ENST00000549699 147 ntBASIC23.21■■□□□ 1.31
NPC1O15118 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NPC1O15118 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NPC1O15118 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NPC1O15118 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.21■■□□□ 1.31
NPC1O15118 SYT6-210ENST00000641643 1587 ntBASIC23.2■■□□□ 1.3
NPC1O15118 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NPC1O15118 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPC1O15118 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.2■■□□□ 1.3
NPC1O15118 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.2■■□□□ 1.3
NPC1O15118 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.2■■□□□ 1.3
NPC1O15118 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPC1O15118 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.2■■□□□ 1.3
NPC1O15118 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NPC1O15118 AC020928.2-201ENST00000588717 2197 ntBASIC23.2■■□□□ 1.3
NPC1O15118 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPC1O15118 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPC1O15118 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPC1O15118 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPC1O15118 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPC1O15118 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.19■■□□□ 1.3
NPC1O15118 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPC1O15118 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
NPC1O15118 AL138724.1-201ENST00000606771 1088 ntBASIC23.19■■□□□ 1.3
NPC1O15118 AL031432.3-201ENST00000607698 485 ntBASIC23.19■■□□□ 1.3
NPC1O15118 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPC1O15118 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NPC1O15118 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPC1O15118 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPC1O15118 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPC1O15118 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.19■■□□□ 1.3
NPC1O15118 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPC1O15118 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NPC1O15118 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.18■■□□□ 1.3
NPC1O15118 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.18■■□□□ 1.3
NPC1O15118 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPC1O15118 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
NPC1O15118 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPC1O15118 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NPC1O15118 AC241377.3-202ENST00000626088 1088 ntBASIC23.17■■□□□ 1.3
NPC1O15118 AC241585.3-202ENST00000628937 1088 ntBASIC23.17■■□□□ 1.3
NPC1O15118 AC245100.8-202ENST00000629247 1058 ntBASIC23.17■■□□□ 1.3
NPC1O15118 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NPC1O15118 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
NPC1O15118 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NPC1O15118 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NPC1O15118 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPC1O15118 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPC1O15118 AC009102.2-201ENST00000606772 1639 ntBASIC23.16■■□□□ 1.3
NPC1O15118 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPC1O15118 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
NPC1O15118 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.16■■□□□ 1.3
NPC1O15118 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPC1O15118 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.15■■□□□ 1.3
NPC1O15118 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
NPC1O15118 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPC1O15118 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NPC1O15118 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPC1O15118 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPC1O15118 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NPC1O15118 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NPC1O15118 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.14■■□□□ 1.29
NPC1O15118 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NPC1O15118 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.14■■□□□ 1.29
NPC1O15118 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.14■■□□□ 1.29
NPC1O15118 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NPC1O15118 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.13■■□□□ 1.29
NPC1O15118 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NPC1O15118 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NPC1O15118 C17orf82-201ENST00000623772 1530 ntBASIC23.13■■□□□ 1.29
NPC1O15118 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
NPC1O15118 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NPC1O15118 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NPC1O15118 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPC1O15118 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
NPC1O15118 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPC1O15118 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPC1O15118 AC011298.3-201ENST00000615796 283 ntBASIC23.12■■□□□ 1.29
NPC1O15118 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPC1O15118 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPC1O15118 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms