Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
TLR4O00206 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
TLR4O00206 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
TLR4O00206 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TLR4O00206 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TLR4O00206 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TLR4O00206 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TLR4O00206 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
TLR4O00206 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
TLR4O00206 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.7■■□□□ 1.22
TLR4O00206 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TLR4O00206 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.69■■□□□ 1.22
TLR4O00206 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.69■■□□□ 1.22
TLR4O00206 DUSP8P4-201ENST00000399538 1761 ntBASIC22.69■■□□□ 1.22
TLR4O00206 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TLR4O00206 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TLR4O00206 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.69■■□□□ 1.22
TLR4O00206 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.69■■□□□ 1.22
TLR4O00206 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.69■■□□□ 1.22
TLR4O00206 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
TLR4O00206 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TLR4O00206 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
TLR4O00206 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TLR4O00206 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
TLR4O00206 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
TLR4O00206 AC092171.4-201ENST00000609130 632 ntBASIC22.68■■□□□ 1.22
TLR4O00206 MIR6089-201ENST00000616698 64 ntBASIC22.68■■□□□ 1.22
TLR4O00206 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TLR4O00206 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TLR4O00206 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.67■■□□□ 1.22
TLR4O00206 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TLR4O00206 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TLR4O00206 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.67■■□□□ 1.22
TLR4O00206 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.67■■□□□ 1.22
TLR4O00206 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
TLR4O00206 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
TLR4O00206 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.67■■□□□ 1.22
TLR4O00206 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TLR4O00206 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TLR4O00206 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TLR4O00206 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TLR4O00206 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TLR4O00206 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.66■■□□□ 1.22
TLR4O00206 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.66■■□□□ 1.22
TLR4O00206 AL022069.1-201ENST00000568025 1636 ntBASIC22.66■■□□□ 1.22
TLR4O00206 SYT6-210ENST00000641643 1587 ntBASIC22.66■■□□□ 1.22
TLR4O00206 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.66■■□□□ 1.22
TLR4O00206 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
TLR4O00206 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TLR4O00206 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TLR4O00206 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TLR4O00206 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
TLR4O00206 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TLR4O00206 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TLR4O00206 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.65■■□□□ 1.22
TLR4O00206 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TLR4O00206 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TLR4O00206 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TLR4O00206 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TLR4O00206 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.65■■□□□ 1.22
TLR4O00206 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.64■■□□□ 1.22
TLR4O00206 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TLR4O00206 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.64■■□□□ 1.22
TLR4O00206 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.64■■□□□ 1.21
TLR4O00206 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.64■■□□□ 1.21
TLR4O00206 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.64■■□□□ 1.21
TLR4O00206 AL136967.2-201ENST00000623968 743 ntBASIC22.64■■□□□ 1.21
TLR4O00206 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.64■■□□□ 1.21
TLR4O00206 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TLR4O00206 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TLR4O00206 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TLR4O00206 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TLR4O00206 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TLR4O00206 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TLR4O00206 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.63■■□□□ 1.21
TLR4O00206 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.63■■□□□ 1.21
TLR4O00206 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.63■■□□□ 1.21
TLR4O00206 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TLR4O00206 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TLR4O00206 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
TLR4O00206 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.63■■□□□ 1.21
TLR4O00206 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.63■■□□□ 1.21
TLR4O00206 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TLR4O00206 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TLR4O00206 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.62■■□□□ 1.21
TLR4O00206 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TLR4O00206 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TLR4O00206 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.62■■□□□ 1.21
TLR4O00206 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.62■■□□□ 1.21
TLR4O00206 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TLR4O00206 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.62■■□□□ 1.21
TLR4O00206 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TLR4O00206 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TLR4O00206 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TLR4O00206 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.61■■□□□ 1.21
TLR4O00206 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.61■■□□□ 1.21
TLR4O00206 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.61■■□□□ 1.21
TLR4O00206 AF213884.3-201ENST00000563833 479 ntBASIC22.61■■□□□ 1.21
TLR4O00206 RARRES2P6-201ENST00000567333 442 ntBASIC22.61■■□□□ 1.21
TLR4O00206 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms