Protein–RNA interactions for Protein: B4DS77

SHISA9, Protein shisa-9, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9B4DS77 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.66■□□□□ 0.74
SHISA9B4DS77 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.66■□□□□ 0.74
SHISA9B4DS77 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA9B4DS77 AL136162.1-201ENST00000607711 1078 ntBASIC19.66■□□□□ 0.74
SHISA9B4DS77 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.66■□□□□ 0.74
SHISA9B4DS77 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA9B4DS77 AL161729.1-201ENST00000604104 1402 ntBASIC19.66■□□□□ 0.74
SHISA9B4DS77 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA9B4DS77 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHISA9B4DS77 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHISA9B4DS77 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.65■□□□□ 0.74
SHISA9B4DS77 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHISA9B4DS77 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SHISA9B4DS77 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SHISA9B4DS77 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHISA9B4DS77 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SHISA9B4DS77 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SHISA9B4DS77 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA9B4DS77 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA9B4DS77 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.64■□□□□ 0.73
SHISA9B4DS77 MIR935-201ENST00000401179 91 ntBASIC19.64■□□□□ 0.73
SHISA9B4DS77 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.64■□□□□ 0.73
SHISA9B4DS77 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA9B4DS77 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA9B4DS77 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.64■□□□□ 0.73
SHISA9B4DS77 AC135279.3-201ENST00000610945 1311 ntBASIC19.64■□□□□ 0.73
SHISA9B4DS77 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.64■□□□□ 0.73
SHISA9B4DS77 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA9B4DS77 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA9B4DS77 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.64■□□□□ 0.73
SHISA9B4DS77 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA9B4DS77 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA9B4DS77 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA9B4DS77 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHISA9B4DS77 AC009102.2-201ENST00000606772 1639 ntBASIC19.63■□□□□ 0.73
SHISA9B4DS77 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SHISA9B4DS77 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHISA9B4DS77 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.63■□□□□ 0.73
SHISA9B4DS77 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.63■□□□□ 0.73
SHISA9B4DS77 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.63■□□□□ 0.73
SHISA9B4DS77 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SHISA9B4DS77 AC024257.2-201ENST00000549699 147 ntBASIC19.62■□□□□ 0.73
SHISA9B4DS77 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHISA9B4DS77 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHISA9B4DS77 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHISA9B4DS77 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SHISA9B4DS77 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SHISA9B4DS77 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SHISA9B4DS77 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SHISA9B4DS77 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA9B4DS77 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SHISA9B4DS77 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA9B4DS77 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA9B4DS77 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA9B4DS77 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.61■□□□□ 0.73
SHISA9B4DS77 DUX4L19-201ENST00000557448 1267 ntBASIC19.61■□□□□ 0.73
SHISA9B4DS77 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA9B4DS77 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA9B4DS77 AP003733.4-201ENST00000623785 1697 ntBASIC19.61■□□□□ 0.73
SHISA9B4DS77 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA9B4DS77 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHISA9B4DS77 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SHISA9B4DS77 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHISA9B4DS77 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.6■□□□□ 0.73
SHISA9B4DS77 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHISA9B4DS77 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
SHISA9B4DS77 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.6■□□□□ 0.73
SHISA9B4DS77 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SHISA9B4DS77 AL031432.3-201ENST00000607698 485 ntBASIC19.6■□□□□ 0.73
SHISA9B4DS77 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.6■□□□□ 0.73
SHISA9B4DS77 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHISA9B4DS77 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.59■□□□□ 0.73
SHISA9B4DS77 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.59■□□□□ 0.73
SHISA9B4DS77 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SHISA9B4DS77 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHISA9B4DS77 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.59■□□□□ 0.73
SHISA9B4DS77 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
SHISA9B4DS77 AC092171.4-201ENST00000609130 632 ntBASIC19.59■□□□□ 0.73
SHISA9B4DS77 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHISA9B4DS77 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHISA9B4DS77 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SHISA9B4DS77 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHISA9B4DS77 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHISA9B4DS77 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SHISA9B4DS77 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SHISA9B4DS77 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHISA9B4DS77 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHISA9B4DS77 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SHISA9B4DS77 AC142381.2-201ENST00000566120 298 ntBASIC19.58■□□□□ 0.72
SHISA9B4DS77 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.58■□□□□ 0.72
SHISA9B4DS77 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.58■□□□□ 0.72
SHISA9B4DS77 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.58■□□□□ 0.72
SHISA9B4DS77 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SHISA9B4DS77 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.58■□□□□ 0.72
SHISA9B4DS77 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHISA9B4DS77 SYT6-210ENST00000641643 1587 ntBASIC19.57■□□□□ 0.72
SHISA9B4DS77 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHISA9B4DS77 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHISA9B4DS77 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHISA9B4DS77 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms