Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SRRM4A7MD48 AC131274.2-201ENST00000580697 1507 ntBASIC18.44■□□□□ 0.54
SRRM4A7MD48 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRRM4A7MD48 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRRM4A7MD48 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.43■□□□□ 0.54
SRRM4A7MD48 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRRM4A7MD48 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.43■□□□□ 0.54
SRRM4A7MD48 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.43■□□□□ 0.54
SRRM4A7MD48 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.43■□□□□ 0.54
SRRM4A7MD48 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRRM4A7MD48 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SRRM4A7MD48 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SRRM4A7MD48 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.43■□□□□ 0.54
SRRM4A7MD48 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SRRM4A7MD48 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRRM4A7MD48 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SRRM4A7MD48 KRT18P24-201ENST00000344739 1156 ntBASIC18.42■□□□□ 0.54
SRRM4A7MD48 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.42■□□□□ 0.54
SRRM4A7MD48 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.42■□□□□ 0.54
SRRM4A7MD48 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.42■□□□□ 0.54
SRRM4A7MD48 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SRRM4A7MD48 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.42■□□□□ 0.54
SRRM4A7MD48 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRRM4A7MD48 AC133561.1-201ENST00000568600 2415 ntBASIC18.42■□□□□ 0.54
SRRM4A7MD48 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SRRM4A7MD48 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SRRM4A7MD48 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.42■□□□□ 0.54
SRRM4A7MD48 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRRM4A7MD48 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.41■□□□□ 0.54
SRRM4A7MD48 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRRM4A7MD48 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRRM4A7MD48 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRRM4A7MD48 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.41■□□□□ 0.54
SRRM4A7MD48 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRRM4A7MD48 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SRRM4A7MD48 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRRM4A7MD48 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.41■□□□□ 0.54
SRRM4A7MD48 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.41■□□□□ 0.54
SRRM4A7MD48 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.41■□□□□ 0.54
SRRM4A7MD48 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRRM4A7MD48 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.41■□□□□ 0.54
SRRM4A7MD48 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRRM4A7MD48 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRRM4A7MD48 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRRM4A7MD48 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRRM4A7MD48 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM4A7MD48 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM4A7MD48 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM4A7MD48 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SRRM4A7MD48 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SRRM4A7MD48 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM4A7MD48 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM4A7MD48 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM4A7MD48 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.39■□□□□ 0.53
SRRM4A7MD48 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.39■□□□□ 0.53
SRRM4A7MD48 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.39■□□□□ 0.53
SRRM4A7MD48 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.39■□□□□ 0.53
SRRM4A7MD48 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.39■□□□□ 0.53
SRRM4A7MD48 AF131216.4-201ENST00000638924 1588 ntBASIC18.38■□□□□ 0.53
SRRM4A7MD48 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SRRM4A7MD48 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM4A7MD48 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.38■□□□□ 0.53
SRRM4A7MD48 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.38■□□□□ 0.53
SRRM4A7MD48 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM4A7MD48 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.38■□□□□ 0.53
SRRM4A7MD48 MIR4281-201ENST00000580852 62 ntBASIC18.38■□□□□ 0.53
SRRM4A7MD48 THA1P-201ENST00000590384 1145 ntBASIC18.38■□□□□ 0.53
SRRM4A7MD48 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM4A7MD48 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM4A7MD48 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SRRM4A7MD48 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SRRM4A7MD48 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM4A7MD48 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.37■□□□□ 0.53
SRRM4A7MD48 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.37■□□□□ 0.53
SRRM4A7MD48 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.37■□□□□ 0.53
SRRM4A7MD48 AC103834.1-201ENST00000520383 144 ntBASIC18.37■□□□□ 0.53
SRRM4A7MD48 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.37■□□□□ 0.53
SRRM4A7MD48 MIR4508-201ENST00000584178 70 ntBASIC18.37■□□□□ 0.53
SRRM4A7MD48 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM4A7MD48 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM4A7MD48 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM4A7MD48 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM4A7MD48 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SRRM4A7MD48 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.37■□□□□ 0.53
SRRM4A7MD48 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SRRM4A7MD48 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.37■□□□□ 0.53
SRRM4A7MD48 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRRM4A7MD48 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms