Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01548A6NM66 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01548A6NM66 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01548A6NM66 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01548A6NM66 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01548A6NM66 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC01548A6NM66 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LINC01548A6NM66 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01548A6NM66 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01548A6NM66 LINC00543-201ENST00000567234 1845 ntBASIC18.1■□□□□ 0.49
LINC01548A6NM66 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC01548A6NM66 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC01548A6NM66 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01548A6NM66 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01548A6NM66 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.1■□□□□ 0.49
LINC01548A6NM66 AC004812.2-201ENST00000611079 2094 ntBASIC18.1■□□□□ 0.49
LINC01548A6NM66 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC01548A6NM66 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LINC01548A6NM66 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01548A6NM66 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01548A6NM66 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01548A6NM66 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC01548A6NM66 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC01548A6NM66 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01548A6NM66 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01548A6NM66 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.08■□□□□ 0.49
LINC01548A6NM66 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC01548A6NM66 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.08■□□□□ 0.48
LINC01548A6NM66 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01548A6NM66 MIR6724-1-201ENST00000616420 92 ntBASIC18.08■□□□□ 0.48
LINC01548A6NM66 MIR6724-2-201ENST00000616483 92 ntBASIC18.08■□□□□ 0.48
LINC01548A6NM66 MIR6724-4-201ENST00000617390 92 ntBASIC18.08■□□□□ 0.48
LINC01548A6NM66 MIR6724-3-201ENST00000622482 92 ntBASIC18.08■□□□□ 0.48
LINC01548A6NM66 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01548A6NM66 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01548A6NM66 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01548A6NM66 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.07■□□□□ 0.48
LINC01548A6NM66 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01548A6NM66 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC01548A6NM66 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
LINC01548A6NM66 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01548A6NM66 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01548A6NM66 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.06■□□□□ 0.48
LINC01548A6NM66 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01548A6NM66 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC01548A6NM66 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.06■□□□□ 0.48
LINC01548A6NM66 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01548A6NM66 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LINC01548A6NM66 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01548A6NM66 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LINC01548A6NM66 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LINC01548A6NM66 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LINC01548A6NM66 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01548A6NM66 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01548A6NM66 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LINC01548A6NM66 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.05■□□□□ 0.48
LINC01548A6NM66 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.05■□□□□ 0.48
LINC01548A6NM66 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01548A6NM66 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01548A6NM66 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01548A6NM66 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01548A6NM66 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01548A6NM66 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01548A6NM66 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01548A6NM66 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.05■□□□□ 0.48
LINC01548A6NM66 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC01548A6NM66 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01548A6NM66 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01548A6NM66 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
LINC01548A6NM66 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01548A6NM66 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.04■□□□□ 0.48
LINC01548A6NM66 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01548A6NM66 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01548A6NM66 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.04■□□□□ 0.48
LINC01548A6NM66 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01548A6NM66 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.04■□□□□ 0.48
LINC01548A6NM66 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.04■□□□□ 0.48
LINC01548A6NM66 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01548A6NM66 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LINC01548A6NM66 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01548A6NM66 ABCB10P4-201ENST00000566803 2184 ntBASIC18.03■□□□□ 0.48
LINC01548A6NM66 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01548A6NM66 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC01548A6NM66 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.03■□□□□ 0.48
LINC01548A6NM66 AL117332.1-201ENST00000622628 974 ntBASIC18.03■□□□□ 0.48
LINC01548A6NM66 AL161729.1-201ENST00000604104 1402 ntBASIC18.03■□□□□ 0.48
LINC01548A6NM66 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01548A6NM66 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LINC01548A6NM66 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01548A6NM66 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01548A6NM66 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01548A6NM66 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.02■□□□□ 0.48
LINC01548A6NM66 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01548A6NM66 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01548A6NM66 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01548A6NM66 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.02■□□□□ 0.48
LINC01548A6NM66 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.02■□□□□ 0.48
LINC01548A6NM66 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.02■□□□□ 0.48
LINC01548A6NM66 AC141586.4-201ENST00000624558 1573 ntBASIC18.02■□□□□ 0.48
LINC01548A6NM66 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms