Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 IKBKGP1-201ENST00000612193 1073 ntBASIC23.37■■□□□ 1.33
SHISA7A6NL88 SLC6A10P-202ENST00000431994 2058 ntBASIC23.37■■□□□ 1.33
SHISA7A6NL88 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHISA7A6NL88 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHISA7A6NL88 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHISA7A6NL88 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHISA7A6NL88 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHISA7A6NL88 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 AC233992.3-201ENST00000607491 485 ntBASIC23.36■■□□□ 1.33
SHISA7A6NL88 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SHISA7A6NL88 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SHISA7A6NL88 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SHISA7A6NL88 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SHISA7A6NL88 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SHISA7A6NL88 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHISA7A6NL88 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.35■■□□□ 1.33
SHISA7A6NL88 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SHISA7A6NL88 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.35■■□□□ 1.33
SHISA7A6NL88 MIR3181-201ENST00000578512 73 ntBASIC23.35■■□□□ 1.33
SHISA7A6NL88 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.35■■□□□ 1.33
SHISA7A6NL88 AL031602.1-201ENST00000633169 911 ntBASIC23.35■■□□□ 1.33
SHISA7A6NL88 RARRES2P11-201ENST00000635158 484 ntBASIC23.35■■□□□ 1.33
SHISA7A6NL88 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SHISA7A6NL88 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SHISA7A6NL88 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.34■■□□□ 1.33
SHISA7A6NL88 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SHISA7A6NL88 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SHISA7A6NL88 BX842568.3-201ENST00000418104 571 ntBASIC23.34■■□□□ 1.33
SHISA7A6NL88 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SHISA7A6NL88 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SHISA7A6NL88 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SHISA7A6NL88 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.33■■□□□ 1.33
SHISA7A6NL88 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.33■■□□□ 1.33
SHISA7A6NL88 AC090192.1-201ENST00000517740 490 ntBASIC23.33■■□□□ 1.33
SHISA7A6NL88 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.33■■□□□ 1.33
SHISA7A6NL88 AC241377.3-202ENST00000626088 1088 ntBASIC23.33■■□□□ 1.33
SHISA7A6NL88 AC241585.3-202ENST00000628937 1088 ntBASIC23.33■■□□□ 1.33
SHISA7A6NL88 AC245100.8-202ENST00000629247 1058 ntBASIC23.33■■□□□ 1.33
SHISA7A6NL88 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SHISA7A6NL88 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHISA7A6NL88 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHISA7A6NL88 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHISA7A6NL88 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SHISA7A6NL88 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.32■■□□□ 1.32
SHISA7A6NL88 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.32■■□□□ 1.32
SHISA7A6NL88 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SHISA7A6NL88 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SHISA7A6NL88 AC022517.1-201ENST00000592429 346 ntBASIC23.32■■□□□ 1.32
SHISA7A6NL88 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHISA7A6NL88 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
SHISA7A6NL88 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.31■■□□□ 1.32
SHISA7A6NL88 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.31■■□□□ 1.32
SHISA7A6NL88 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.31■■□□□ 1.32
SHISA7A6NL88 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SHISA7A6NL88 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.31■■□□□ 1.32
SHISA7A6NL88 MIR6089-201ENST00000616698 64 ntBASIC23.31■■□□□ 1.32
SHISA7A6NL88 AC092437.1-201ENST00000624794 1048 ntBASIC23.31■■□□□ 1.32
SHISA7A6NL88 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.31■■□□□ 1.32
SHISA7A6NL88 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.31■■□□□ 1.32
SHISA7A6NL88 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHISA7A6NL88 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHISA7A6NL88 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHISA7A6NL88 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.3■■□□□ 1.32
SHISA7A6NL88 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHISA7A6NL88 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SHISA7A6NL88 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
SHISA7A6NL88 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.3■■□□□ 1.32
SHISA7A6NL88 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.3■■□□□ 1.32
SHISA7A6NL88 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.3■■□□□ 1.32
SHISA7A6NL88 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHISA7A6NL88 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHISA7A6NL88 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHISA7A6NL88 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHISA7A6NL88 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.29■■□□□ 1.32
SHISA7A6NL88 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHISA7A6NL88 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.29■■□□□ 1.32
SHISA7A6NL88 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.29■■□□□ 1.32
SHISA7A6NL88 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHISA7A6NL88 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SHISA7A6NL88 AC092803.2-201ENST00000564287 1899 ntBASIC23.29■■□□□ 1.32
SHISA7A6NL88 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.28■■□□□ 1.32
SHISA7A6NL88 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
SHISA7A6NL88 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHISA7A6NL88 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHISA7A6NL88 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHISA7A6NL88 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHISA7A6NL88 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SHISA7A6NL88 KRT18P5-201ENST00000436075 1291 ntBASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms