Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV11-1A0A0K0K1C0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV11-1A0A0K0K1C0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRBV11-1A0A0K0K1C0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV11-1A0A0K0K1C0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.24■□□□□ 0.99
TRBV11-1A0A0K0K1C0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV11-1A0A0K0K1C0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TRBV11-1A0A0K0K1C0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TRBV11-1A0A0K0K1C0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV11-1A0A0K0K1C0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV11-1A0A0K0K1C0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV11-1A0A0K0K1C0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.23■□□□□ 0.99
TRBV11-1A0A0K0K1C0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV11-1A0A0K0K1C0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.23■□□□□ 0.99
TRBV11-1A0A0K0K1C0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TRBV11-1A0A0K0K1C0 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.23■□□□□ 0.99
TRBV11-1A0A0K0K1C0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.23■□□□□ 0.99
TRBV11-1A0A0K0K1C0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV11-1A0A0K0K1C0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV11-1A0A0K0K1C0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV11-1A0A0K0K1C0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV11-1A0A0K0K1C0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV11-1A0A0K0K1C0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
TRBV11-1A0A0K0K1C0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV11-1A0A0K0K1C0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV11-1A0A0K0K1C0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRBV11-1A0A0K0K1C0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.22■□□□□ 0.99
TRBV11-1A0A0K0K1C0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.22■□□□□ 0.99
TRBV11-1A0A0K0K1C0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.22■□□□□ 0.99
TRBV11-1A0A0K0K1C0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV11-1A0A0K0K1C0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV11-1A0A0K0K1C0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV11-1A0A0K0K1C0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV11-1A0A0K0K1C0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV11-1A0A0K0K1C0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV11-1A0A0K0K1C0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV11-1A0A0K0K1C0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV11-1A0A0K0K1C0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRBV11-1A0A0K0K1C0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV11-1A0A0K0K1C0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV11-1A0A0K0K1C0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.19■□□□□ 0.98
TRBV11-1A0A0K0K1C0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV11-1A0A0K0K1C0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.19■□□□□ 0.98
TRBV11-1A0A0K0K1C0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV11-1A0A0K0K1C0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.19■□□□□ 0.98
TRBV11-1A0A0K0K1C0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.19■□□□□ 0.98
TRBV11-1A0A0K0K1C0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 AL136116.3-201ENST00000402907 1138 ntBASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV11-1A0A0K0K1C0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 AL512631.2-201ENST00000604634 923 ntBASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.17■□□□□ 0.98
TRBV11-1A0A0K0K1C0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TRBV11-1A0A0K0K1C0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV11-1A0A0K0K1C0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
TRBV11-1A0A0K0K1C0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV11-1A0A0K0K1C0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV11-1A0A0K0K1C0 MIR4466-201ENST00000606121 54 ntBASIC21.16■□□□□ 0.98
TRBV11-1A0A0K0K1C0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV11-1A0A0K0K1C0 ALDH1A3-203ENST00000557963 1670 ntBASIC21.15■□□□□ 0.98
TRBV11-1A0A0K0K1C0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV11-1A0A0K0K1C0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV11-1A0A0K0K1C0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV11-1A0A0K0K1C0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV11-1A0A0K0K1C0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TRBV11-1A0A0K0K1C0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV11-1A0A0K0K1C0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms