Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-2A0A0B4J237 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-2A0A0B4J237 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAV8-2A0A0B4J237 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-2A0A0B4J237 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRAV8-2A0A0B4J237 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRAV8-2A0A0B4J237 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRAV8-2A0A0B4J237 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV8-2A0A0B4J237 AC068473.5-201ENST00000616428 2072 ntBASIC17.32■□□□□ 0.36
TRAV8-2A0A0B4J237 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-2A0A0B4J237 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-2A0A0B4J237 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV8-2A0A0B4J237 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-2A0A0B4J237 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-2A0A0B4J237 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV8-2A0A0B4J237 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 AL161729.1-201ENST00000604104 1402 ntBASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 AC019171.1-201ENST00000601251 1056 ntBASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 AC011551.1-201ENST00000614101 683 ntBASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-2A0A0B4J237 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-2A0A0B4J237 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV8-2A0A0B4J237 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-2A0A0B4J237 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV8-2A0A0B4J237 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-2A0A0B4J237 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRAV8-2A0A0B4J237 AC139795.1-202ENST00000500444 432 ntBASIC17.3■□□□□ 0.36
TRAV8-2A0A0B4J237 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV8-2A0A0B4J237 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-2A0A0B4J237 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV8-2A0A0B4J237 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-2A0A0B4J237 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV8-2A0A0B4J237 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.29■□□□□ 0.36
TRAV8-2A0A0B4J237 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-2A0A0B4J237 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV8-2A0A0B4J237 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV8-2A0A0B4J237 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV8-2A0A0B4J237 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV8-2A0A0B4J237 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-2A0A0B4J237 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRAV8-2A0A0B4J237 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-2A0A0B4J237 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-2A0A0B4J237 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 AC012676.1-201ENST00000574705 1949 ntBASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV8-2A0A0B4J237 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-2A0A0B4J237 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRAV8-2A0A0B4J237 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-2A0A0B4J237 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-2A0A0B4J237 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV8-2A0A0B4J237 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-2A0A0B4J237 AL022069.1-201ENST00000568025 1636 ntBASIC17.27■□□□□ 0.36
TRAV8-2A0A0B4J237 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.27■□□□□ 0.35
TRAV8-2A0A0B4J237 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-2A0A0B4J237 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-2A0A0B4J237 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 AC004987.1-201ENST00000428627 508 ntBASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-2A0A0B4J237 AC022616.5-201ENST00000518796 181 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms