Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.84■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 AC004812.2-201ENST00000611079 2094 ntBASIC20.84■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.83■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.83■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.83■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.83■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.83■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.83■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.83■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.83■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.83■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.82■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.82■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 AC092028.1-203ENST00000608262 953 ntBASIC20.82■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.82■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.8■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 SNX5-217ENST00000606557 1087 ntBASIC20.8■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 KRT16P3-201ENST00000439127 1283 ntBASIC20.79■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 TSPY9P-201ENST00000440215 945 ntBASIC20.79■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 TSPY11P-201ENST00000442607 1045 ntBASIC20.79■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.78■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.78■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.78■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.77■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.77■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.77■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.77■□□□□ 0.92
TNFSF12-TNFSF13A0A0A6YY99 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.77■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.76■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.74■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.74■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms