Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 RN7SL23P-201ENST00000484055 275 ntBASIC16.64■□□□□ 0.25
TRIM17Q9Y577 GOLGA2P7-209ENST00000560408 745 ntBASIC16.64■□□□□ 0.25
TRIM17Q9Y577 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 AC004686.1-201ENST00000605113 538 ntBASIC16.64■□□□□ 0.25
TRIM17Q9Y577 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 LINC02447-202ENST00000501888 2146 ntBASIC16.64■□□□□ 0.25
TRIM17Q9Y577 REXO1L4P-201ENST00000605109 1937 ntBASIC16.64■□□□□ 0.25
TRIM17Q9Y577 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM17Q9Y577 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.63■□□□□ 0.25
TRIM17Q9Y577 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 MIR1301-201ENST00000408518 82 ntBASIC16.63■□□□□ 0.25
TRIM17Q9Y577 AC073869.2-201ENST00000417338 1026 ntBASIC16.63■□□□□ 0.25
TRIM17Q9Y577 AC004522.1-201ENST00000419978 654 ntBASIC16.63■□□□□ 0.25
TRIM17Q9Y577 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 GNG10P1-201ENST00000452289 199 ntBASIC16.63■□□□□ 0.25
TRIM17Q9Y577 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 RPL18AP8-201ENST00000486071 528 ntBASIC16.63■□□□□ 0.25
TRIM17Q9Y577 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 RN7SL582P-201ENST00000491078 279 ntBASIC16.63■□□□□ 0.25
TRIM17Q9Y577 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 AC006483.2-201ENST00000609813 515 ntBASIC16.63■□□□□ 0.25
TRIM17Q9Y577 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 SALL4P5-201ENST00000419001 1760 ntBASIC16.63■□□□□ 0.25
TRIM17Q9Y577 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM17Q9Y577 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 REXO1L2P-201ENST00000425429 2069 ntBASIC16.62■□□□□ 0.25
TRIM17Q9Y577 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 AC092364.2-201ENST00000596710 2692 ntBASIC16.62■□□□□ 0.25
TRIM17Q9Y577 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.62■□□□□ 0.25
TRIM17Q9Y577 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 AC108734.2-201ENST00000420887 1069 ntBASIC16.62■□□□□ 0.25
TRIM17Q9Y577 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM17Q9Y577 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms