Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 ACKR1-201ENST00000368121 1240 ntBASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 AC023310.1-201ENST00000554836 735 ntBASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 AC025279.2-201ENST00000569730 653 ntBASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FNDC3AQ9Y2H6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 AL158070.2-201ENST00000623713 1621 ntBASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 GHSR-202ENST00000427970 912 ntBASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 AC093813.1-201ENST00000605066 256 ntBASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 AL022328.3-201ENST00000607943 679 ntBASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 AC007787.1-201ENST00000588095 1583 ntBASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FNDC3AQ9Y2H6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
FNDC3AQ9Y2H6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms