Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC00474Q9P2X8 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC00474Q9P2X8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
LINC00474Q9P2X8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC00474Q9P2X8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
LINC00474Q9P2X8 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
LINC00474Q9P2X8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC00474Q9P2X8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC9.85□□□□□ -0.83
LINC00474Q9P2X8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LINC00474Q9P2X8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC9.85□□□□□ -0.83
LINC00474Q9P2X8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 SRC-202ENST00000373558 4304 ntTSL 5 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 AC099521.3-201ENST00000624251 2938 ntBASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 KRT8P22-201ENST00000562317 1415 ntBASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 API5-202ENST00000420461 2009 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 CICP17-201ENST00000418553 2377 ntBASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 ACKR1-201ENST00000368121 1240 ntBASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 CRB3P1-201ENST00000449338 276 ntBASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 AC114812.1-204ENST00000449669 728 ntBASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 VDAC1P7-201ENST00000462417 847 ntBASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 MIR8072-201ENST00000614241 80 ntBASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 KRT8P44-201ENST00000441609 1350 ntBASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 AC006486.2-201ENST00000624246 2199 ntBASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
LINC00474Q9P2X8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC00474Q9P2X8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC00474Q9P2X8 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
LINC00474Q9P2X8 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC00474Q9P2X8 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC00474Q9P2X8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC00474Q9P2X8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC00474Q9P2X8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
LINC00474Q9P2X8 DRD5P1-201ENST00000456605 1438 ntBASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms