Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 TSEN15P1-201ENST00000423257 515 ntBASIC14.72□□□□□ -0.05
MKS1Q9NXB0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 AC114812.1-204ENST00000449669 728 ntBASIC14.72□□□□□ -0.05
MKS1Q9NXB0 AC097493.3-201ENST00000509725 367 ntBASIC14.72□□□□□ -0.05
MKS1Q9NXB0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 TUBB8P4-201ENST00000511806 1324 ntBASIC14.71□□□□□ -0.05
MKS1Q9NXB0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 KHSRPP1-201ENST00000427983 1768 ntBASIC14.71□□□□□ -0.05
MKS1Q9NXB0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 AC067863.1-201ENST00000494933 530 ntBASIC14.71□□□□□ -0.05
MKS1Q9NXB0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 SORD2P-201ENST00000558556 1069 ntBASIC14.71□□□□□ -0.05
MKS1Q9NXB0 AC120045.2-201ENST00000567334 178 ntBASIC14.71□□□□□ -0.05
MKS1Q9NXB0 SPDYE22P-201ENST00000582158 798 ntBASIC14.71□□□□□ -0.05
MKS1Q9NXB0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MKS1Q9NXB0 AC073869.1-201ENST00000415574 2762 ntBASIC14.71□□□□□ -0.06
MKS1Q9NXB0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
MKS1Q9NXB0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
MKS1Q9NXB0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.71□□□□□ -0.06
MKS1Q9NXB0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
MKS1Q9NXB0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
MKS1Q9NXB0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms