Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 FAM21FP-201ENST00000426241 1131 ntBASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 YBX1P6-201ENST00000442962 1002 ntBASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 BNIP3P42-201ENST00000454982 569 ntBASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 BNIP3P29-201ENST00000598302 571 ntBASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 AC011447.5-201ENST00000616168 564 ntBASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM39Q9HCM9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 AC106820.3-201ENST00000561653 397 ntBASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 DUX4L45-201ENST00000566406 1057 ntBASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 AC079781.5-202ENST00000641784 3743 ntBASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 FKBP4P6-201ENST00000457486 1332 ntBASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 ST20-AS1-201ENST00000560255 4223 ntBASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
TRIM39Q9HCM9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms