Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 NUTM2HP-201ENST00000442076 2498 ntBASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 AC134915.1-201ENST00000426461 574 ntBASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 ACTG1P3-201ENST00000431775 1114 ntBASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 CROCCP4-201ENST00000457096 498 ntBASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 SNX29P1-201ENST00000548357 1007 ntBASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 MIR5189-201ENST00000577370 114 ntBASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 MIR4259-201ENST00000584466 101 ntBASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 MIR6775-201ENST00000617557 69 ntBASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 AC113367.3-201ENST00000508316 1912 ntBASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 PCDHA3-202ENST00000532566 4594 ntBASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 AC018665.1-201ENST00000622927 1362 ntBASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF4Q9BUZ4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 AC104989.1-201ENST00000519711 778 ntBASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 SLC25A47P1-201ENST00000531577 414 ntBASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 TDH-203ENST00000531764 1110 ntBASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 ENPP7P5-201ENST00000541031 1031 ntBASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms