Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 AC006986.1-201ENST00000612764 241 ntBASIC23.75■■□□□ 1.39
IFT140Q96RY7 AL512324.3-201ENST00000619383 882 ntBASIC23.75■■□□□ 1.39
IFT140Q96RY7 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IFT140Q96RY7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
IFT140Q96RY7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IFT140Q96RY7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IFT140Q96RY7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
IFT140Q96RY7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 AL008638.4-201ENST00000624792 1315 ntBASIC23.75■■□□□ 1.39
IFT140Q96RY7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IFT140Q96RY7 KRT8P43-201ENST00000406052 1458 ntBASIC23.75■■□□□ 1.39
IFT140Q96RY7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IFT140Q96RY7 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 DKKL1P1-201ENST00000400550 698 ntBASIC23.75■■□□□ 1.39
IFT140Q96RY7 GGTLC4P-201ENST00000402176 664 ntBASIC23.75■■□□□ 1.39
IFT140Q96RY7 AC147876.1-201ENST00000504408 322 ntBASIC23.75■■□□□ 1.39
IFT140Q96RY7 HNRNPA1P56-201ENST00000505767 954 ntBASIC23.75■■□□□ 1.39
IFT140Q96RY7 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 MAX-218ENST00000557746 571 ntTSL 4 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 PSME2-217ENST00000615264 874 ntTSL 5 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 PSME2-218ENST00000630027 185 ntTSL 3 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 AC245369.7-201ENST00000631386 350 ntBASIC23.75■■□□□ 1.39
IFT140Q96RY7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
IFT140Q96RY7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT140Q96RY7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
IFT140Q96RY7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT140Q96RY7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT140Q96RY7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT140Q96RY7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
IFT140Q96RY7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT140Q96RY7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT140Q96RY7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT140Q96RY7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
IFT140Q96RY7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT140Q96RY7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT140Q96RY7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
IFT140Q96RY7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT140Q96RY7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC23.74■■□□□ 1.39
IFT140Q96RY7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
IFT140Q96RY7 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC23.74■■□□□ 1.39
IFT140Q96RY7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC23.74■■□□□ 1.39
IFT140Q96RY7 AL773545.2-201ENST00000442149 472 ntBASIC23.74■■□□□ 1.39
IFT140Q96RY7 AC133141.1-201ENST00000443015 339 ntBASIC23.74■■□□□ 1.39
IFT140Q96RY7 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC23.74■■□□□ 1.39
IFT140Q96RY7 CDK4P1-201ENST00000454213 828 ntBASIC23.74■■□□□ 1.39
IFT140Q96RY7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
IFT140Q96RY7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFT140Q96RY7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
IFT140Q96RY7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC23.73■■□□□ 1.39
IFT140Q96RY7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 AC112693.3-201ENST00000624819 1983 ntBASIC23.73■■□□□ 1.39
IFT140Q96RY7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC23.73■■□□□ 1.39
IFT140Q96RY7 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
IFT140Q96RY7 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
IFT140Q96RY7 AD000864.1-201ENST00000624076 2295 ntBASIC23.73■■□□□ 1.39
IFT140Q96RY7 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC23.73■■□□□ 1.39
IFT140Q96RY7 HLA-DMA-202ENST00000395303 1007 ntBASIC23.73■■□□□ 1.39
IFT140Q96RY7 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 MED15P3-201ENST00000413613 326 ntBASIC23.73■■□□□ 1.39
IFT140Q96RY7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 ALG1L15P-201ENST00000482834 794 ntBASIC23.73■■□□□ 1.39
IFT140Q96RY7 AC100858.1-201ENST00000514059 1228 ntBASIC23.73■■□□□ 1.39
IFT140Q96RY7 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 RN7SL455P-201ENST00000580629 282 ntBASIC23.73■■□□□ 1.39
IFT140Q96RY7 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC23.73■■□□□ 1.39
IFT140Q96RY7 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
IFT140Q96RY7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
IFT140Q96RY7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
IFT140Q96RY7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
IFT140Q96RY7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC23.72■■□□□ 1.39
IFT140Q96RY7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
IFT140Q96RY7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC23.72■■□□□ 1.39
IFT140Q96RY7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
IFT140Q96RY7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC23.72■■□□□ 1.39
IFT140Q96RY7 AC092850.2-201ENST00000623821 2697 ntBASIC23.72■■□□□ 1.39
IFT140Q96RY7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
IFT140Q96RY7 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC23.72■■□□□ 1.39
IFT140Q96RY7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IFT140Q96RY7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
IFT140Q96RY7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IFT140Q96RY7 PCDHGB8P-201ENST00000502926 1973 ntBASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms